Miyakogusa Predicted Gene
- Lj0g3v0212909.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0212909.1 NODE_55989_length_591_cov_38.724197.path1.1
(594 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC596328 504 e-142
gnl|LJGI|TC73039 similar to UniRef100_A7Q183 Cluster: Chromosome... 343 8e-94
gnl|LJGI|FS349596 similar to UniRef100_A7Q183 Cluster: Chromosom... 236 1e-61
>gnl|LJGI|DC596328
Length = 386
Score = 504 bits (254), Expect = e-142
Identities = 257/258 (99%)
Strand = Plus / Plus
Query: 1 atggttcccaacgtaatgtgcctcatccagccctccaatcctccctgctccgtctgcgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggttcccaacgtaatgtgcctcatccagccctccaatcctccctgctccgtctgcgtt 188
Query: 61 cagtcactgactctccctcccgatcggaaccctaattacaggtgcaatacatctcttcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 cagtcactgactctccctcccgatcggaaccctaattacaggtgcaatacatctcttcta 248
Query: 121 attgattatcgtgaaagcaatggtgatcacaactacatattgatcgatgttgggaagaca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 249 attgattatcgtgaaagcaatggtgatcacaactacatattgatcgatgttgggaaaaca 308
Query: 181 ttcagagagggtgtgcttagatggtttacttcacatcagattccaagaattgattctatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttcagagagggtgtgcttagatggtttacttcacatcagattccaagaattgattctatt 368
Query: 241 attttaactcacgagcat 258
||||||||||||||||||
Sbjct: 369 attttaactcacgagcat 386
>gnl|LJGI|TC73039 similar to UniRef100_A7Q183 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1337
Score = 343 bits (173), Expect = 8e-94
Identities = 329/381 (86%)
Strand = Plus / Plus
Query: 214 catcagattccaagaattgattctattattttaactcacgagcatgcggatgcagtcctt 273
||||| ||||| ||||||||||| ||| |||| ||||| |||||||| |||| |||||||
Sbjct: 319 catcacattcccagaattgattccattgttttgactcatgagcatgctgatgtagtcctt 378
Query: 274 ggattggatgatatacgtgctgtgcagccttttagtccaacaaatgatattgaacctact 333
|||||||||||| | |||||||||||||| |||||||| || ||| ||||||| || |||
Sbjct: 379 ggattggatgatgttcgtgctgtgcagccgtttagtcccacgaataatattgatcccact 438
Query: 334 cccatatacctgagtcagcattcaatggatagcatagcagagaagtttccttatttggtt 393
|| |||||| | | ||||||||| ||||||||| | | | ||||||||||||||||||||
Sbjct: 439 ccgatatacttaactcagcattcgatggatagcttggaaaagaagtttccttatttggtt 498
Query: 394 cagaaaaaactcaaggaagggcaagaagtacgaagggtggctcagatgtcctggaacatt 453
| || ||||| ||| ||||| |||||| |||||||||| |||||| | | |||||||||
Sbjct: 499 ccgacaaaacccaaagaaggacaagaaatacgaagggttgctcagttttgctggaacata 558
Query: 454 attgctgatgactgcaatcaaccattttctgcatcaggattaaagttcactcctttacca 513
|||||||| || || || || |||||| |||||| | ||||| | | ||||||||||
Sbjct: 559 attgctgaggattgtaaacagccatttgttgcatctagcttaaaactgattcctttacca 618
Query: 514 gttatgcatggagaggattacatctgtttgggctttctttttggtgagaaaagtagggtg 573
|| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 619 gtaatgcatggagaggattacatctgtctgggctttctttttggtgagaaaagtagggtg 678
Query: 574 gcttatatatctgatgtttca 594
|||||||||||||||||||||
Sbjct: 679 gcttatatatctgatgtttca 699
>gnl|LJGI|FS349596 similar to UniRef100_A7Q183 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 720
Score = 236 bits (119), Expect = 1e-61
Identities = 215/247 (87%)
Strand = Plus / Minus
Query: 348 tcagcattcaatggatagcatagcagagaagtttccttatttggttcagaaaaaactcaa 407
||||||||| ||||||||| | | | ||||||||||||||||||||| || ||||| |||
Sbjct: 708 tcagcattcgatggatagcttggaaaagaagtttccttatttggttccgacaaaacccaa 649
Query: 408 ggaagggcaagaagtacgaagggtggctcagatgtcctggaacattattgctgatgactg 467
||||| |||||| |||||||||| |||||| | | ||||||||| |||||||| || ||
Sbjct: 648 agaaggacaagaaatacgaagggttgctcagttttgctggaacataattgctgaggattg 589
Query: 468 caatcaaccattttctgcatcaggattaaagttcactcctttaccagttatgcatggaga 527
|| || |||||| |||||| | ||||| | | |||||||||||| |||||||||||
Sbjct: 588 taaacagccatttgttgcatctagcttaaaactgattcctttaccagtaatgcatggaga 529
Query: 528 ggattacatctgtttgggctttctttttggtgagaaaagtagggtggcttatatatctga 587
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ggattacatctgtctgggctttctttttggtgagaaaagtagggtggcttatatatctga 469
Query: 588 tgtttca 594
|||||||
Sbjct: 468 tgtttca 462