Miyakogusa Predicted Gene

Lj0g3v0212839.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0212839.1 tr|I1MHL7|I1MHL7_SOYBN Pectinesterase OS=Glycine
max GN=Gma.49765 PE=3 SV=1,86.26,0,no description,Pectin lyase fold;
Pectinesterase,Pectinesterase, catalytic;
PECTINESTERASE_2,Pectine,NODE_34784_length_966_cov_55.968945.path2.1
         (547 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60009 similar to UniRef100_Q43062 Cluster: Pectineste...    78   6e-14

>gnl|LJGI|TC60009 similar to UniRef100_Q43062 Cluster: Pectinesterase PPE8B precursor;
            n=1; Prunus persica|Rep: Pectinesterase PPE8B precursor -
            Prunus persica (Peach), partial (73%)
          Length = 1796

 Score = 77.8 bits (39), Expect = 6e-14
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                        
Query: 478  caatttattgaggggaatctgtggttaccttccacaggtgtaactttcactgctggactg 537
            |||||||||||||||||||||||||| ||||| ||||||||| ||| ||||| |||| ||
Sbjct: 1533 caatttattgaggggaatctgtggttgccttctacaggtgtagcttacactggtggattg 1592

                   
Query: 538  ggagttt 544
             ||||||
Sbjct: 1593 tgagttt 1599



 Score = 61.9 bits (31), Expect = 4e-09
 Identities = 82/99 (82%)
 Strand = Plus / Plus

                                                                        
Query: 241  acgtacctcgggagaccgtggaagcaatattctagaacaattctcatgcagtcttacata 300
            |||||||| || |||||||||||| | ||||| |||||| || ||||||| || | ||| 
Sbjct: 1302 acgtaccttggaagaccgtggaaggagtattcaagaacagttttcatgcaatcgttcatg 1361

                                                   
Query: 301  agtgatgtgttaagaccggaagggtggttagagtggaat 339
            ||||||||| | ||  |  ||||||||||||||||||||
Sbjct: 1362 agtgatgtggtgagttcacaagggtggttagagtggaat 1400