Miyakogusa Predicted Gene

Lj0g3v0212379.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0212379.1 Non Chatacterized Hit- tr|I1Q6U9|I1Q6U9_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,35.48,4e-16,BASIC HELIX-LOOP-HELIX (BHLH) FAMILY PROTEIN,NULL;
STEROL REGULATORY ELEMENT-BINDING PROTEIN,NULL,CUFF.13669.1
         (519 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63440 similar to UniRef100_A7PN89 Cluster: Chromosome...  1029   0.0  
gnl|LJGI|TC72509 weakly similar to UniRef100_A7PN89 Cluster: Chr...   392   e-109

>gnl|LJGI|TC63440 similar to UniRef100_A7PN89 Cluster: Chromosome chr1 scaffold_22,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_22, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (87%)
          Length = 1558

 Score = 1029 bits (519), Expect = 0.0
 Identities = 519/519 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgccatggagaaacagtcattggcgtgtccaaaactttgttggtcaacctcctgctgtg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623  atgccatggagaaacagtcattggcgtgtccaaaactttgttggtcaacctcctgctgtg 682

                                                                        
Query: 61   aggaatggttcgggtccagtatcaccttttcctgcaaagttcgacgatagcaatgttagc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683  aggaatggttcgggtccagtatcaccttttcctgcaaagttcgacgatagcaatgttagc 742

                                                                        
Query: 121  atctctccaaccatgcttagtggcacccagaatatgatagatcctgatcagagcagggat 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743  atctctccaaccatgcttagtggcacccagaatatgatagatcctgatcagagcagggat 802

                                                                        
Query: 181  attctcagcaagacagcagagaggcaacctgatttagtaagcaagggaatacctctgccc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803  attctcagcaagacagcagagaggcaacctgatttagtaagcaagggaatacctctgccc 862

                                                                        
Query: 241  ttggctatgcatgcaaacatgtctgttcctgtaagaagtgatggtgtacctgcccatcct 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863  ttggctatgcatgcaaacatgtctgttcctgtaagaagtgatggtgtacctgcccatcct 922

                                                                        
Query: 301  cttcagggaacgctttctgatgcacaatcaactgaatgcccagcaactagtgagccacag 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923  cttcagggaacgctttctgatgcacaatcaactgaatgcccagcaactagtgagccacag 982

                                                                        
Query: 361  aaccagcaggacgaactgacagttgaaggagggacaattagcatttcaagtgtatactcc 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983  aaccagcaggacgaactgacagttgaaggagggacaattagcatttcaagtgtatactcc 1042

                                                                        
Query: 421  caagggctgttgaacaatctaactcaagcgctacagagtgctggtttagatctgtcacaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 caagggctgttgaacaatctaactcaagcgctacagagtgctggtttagatctgtcacaa 1102

                                                   
Query: 481  gctagcatctctgtacagattaatcttgggaaccgggcg 519
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 1103 gctagcatctctgtacagattaatcttgggaaccgggcg 1141


>gnl|LJGI|TC72509 weakly similar to UniRef100_A7PN89 Cluster: Chromosome chr1
           scaffold_22, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_22, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (37%)
          Length = 700

 Score =  392 bits (198), Expect = e-109
 Identities = 198/198 (100%)
 Strand = Plus / Plus

                                                                       
Query: 322 gcacaatcaactgaatgcccagcaactagtgagccacagaaccagcaggacgaactgaca 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gcacaatcaactgaatgcccagcaactagtgagccacagaaccagcaggacgaactgaca 60

                                                                       
Query: 382 gttgaaggagggacaattagcatttcaagtgtatactcccaagggctgttgaacaatcta 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gttgaaggagggacaattagcatttcaagtgtatactcccaagggctgttgaacaatcta 120

                                                                       
Query: 442 actcaagcgctacagagtgctggtttagatctgtcacaagctagcatctctgtacagatt 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actcaagcgctacagagtgctggtttagatctgtcacaagctagcatctctgtacagatt 180

                             
Query: 502 aatcttgggaaccgggcg 519
           ||||||||||||||||||
Sbjct: 181 aatcttgggaaccgggcg 198