Miyakogusa Predicted Gene
- Lj0g3v0212229.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0212229.1 Non Chatacterized Hit- tr|K3XUX0|K3XUX0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si005727,39.84,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Protein kinase-like (PK-like),Protein kinase-like
d,CUFF.13648.1
(393 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS352914 weakly similar to UniRef100_UPI0000048B80 Clus... 178 2e-44
gnl|LJGI|FS351385 weakly similar to UniRef100_A7QQU5 Cluster: Ch... 62 3e-09
gnl|LJGI|BP084360 weakly similar to UniRef100_Q0JEP0 Cluster: Os... 56 2e-07
>gnl|LJGI|FS352914 weakly similar to UniRef100_UPI0000048B80 Cluster: EFR (EF-TU
RECEPTOR); ATP binding / kinase/ protein
serine/threonine kinase; n=1; Arabidopsis thaliana|Rep:
EFR (EF-TU RECEPTOR); ATP binding / kinase/ protein
serine/threonine kinase - Arabidopsis thaliana, partial
(8%)
Length = 738
Score = 178 bits (90), Expect = 2e-44
Identities = 117/126 (92%)
Strand = Plus / Minus
Query: 1 atgggttcagaggtgtcaattgagggtgacatgtatagctttggaattctggttttagaa 60
|||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 607 atgggttctgaggtttcaattgaaggtgacatgtatagctttggaattctagttttagaa 548
Query: 61 atgttaactggaaagagtcccactgatgaaatgttcaaagatggtcataatctccataat 120
||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 547 atgttaactggaaggagacccacagatgaaatgtttgaagatggtcataatctccataat 488
Query: 121 tatgtt 126
||||||
Sbjct: 487 tatgtt 482
Score = 119 bits (60), Expect = 1e-26
Identities = 108/124 (87%)
Strand = Plus / Minus
Query: 230 tgcaacctaatgccgagaaatgcttactttcacttttgagaattgctcttgcatgttcaa 289
|||| ||||||| |||||||| |||||||||||||| || ||||| |||||||| ||
Sbjct: 384 tgcatcctaatgtagagaaatgtttactttcactttttagtattgcacttgcatgctccg 325
Query: 290 tgcaatcaccaaaagaaagaatgagtatggttgatgtcataagagagcttaacttaatca 349
|| |||| ||||||| ||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 324 tggaatcgccaaaagcaagaatgagtatggttgatgtcataagagagctcaatataatca 265
Query: 350 aaag 353
||||
Sbjct: 264 aaag 261
>gnl|LJGI|FS351385 weakly similar to UniRef100_A7QQU5 Cluster: Chromosome undetermined
scaffold_144, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_144,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (6%)
Length = 666
Score = 61.9 bits (31), Expect = 3e-09
Identities = 85/103 (82%)
Strand = Plus / Minus
Query: 245 agaaatgcttactttcacttttgagaattgctcttgcatgttcaatgcaatcaccaaaag 304
|||| |||||| | |||||||| || |||| ||||| |||||| || ||||||||||||
Sbjct: 544 agaagtgcttagtctcactttttaggattggacttgcttgttcagtggaatcaccaaaag 485
Query: 305 aaagaatgagtatggttgatgtcataagagagcttaacttaat 347
||||||||| ||| | ||||||| |||||||| ||| ||||
Sbjct: 484 aaagaatgaatatattggatgtcactagagagctaaacataat 442
>gnl|LJGI|BP084360 weakly similar to UniRef100_Q0JEP0 Cluster: Os04g0227000 protein;
n=1; Oryza sativa Japonica Group|Rep: Os04g0227000
protein - Oryza sativa subsp. japonica (Rice), partial
(7%)
Length = 381
Score = 56.0 bits (28), Expect = 2e-07
Identities = 88/108 (81%)
Strand = Plus / Minus
Query: 28 gacatgtatagctttggaattctggttttagaaatgttaactggaaagagtcccactgat 87
|||||||||||||| || ||||| || || |||||| | || |||| || ||||| |||
Sbjct: 364 gacatgtatagcttcgggattcttgtgttggaaatgcttaccggaagaaggcccacagat 305
Query: 88 gaaatgttcaaagatggtcataatctccataattatgttgaagtttca 135
||||||||| |||| ||||| ||||| || || | ||||||| |||||
Sbjct: 304 gaaatgttcgaagacggtcaaaatctgcacaagtttgttgaaatttca 257