Miyakogusa Predicted Gene

Lj0g3v0211669.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0211669.1 tr|A9TWW4|A9TWW4_PHYPA ATP-binding cassette
transporter, subfamily C, member 3, group MRP protein
Pp,33.12,1e-18,PREDICTED: SIMILAR TO ATP-BINDING CASSETTE C5 SPLICING
VARIANT A,NULL; FAMILY NOT NAMED,NULL,gene.g16339.t1.1
         (555 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78080                                                      488   e-137

>gnl|LJGI|TC78080 
          Length = 547

 Score =  488 bits (246), Expect = e-137
 Identities = 261/266 (98%)
 Strand = Plus / Plus

                                                                       
Query: 290 tacacaataaccttcaaaagcctagttctaaggagaataaagatttccttgatgaaacaa 349
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5   tacacaataaccttcaaaagcctagttctaaggagaataaagatttccttgatgaaacaa 64

                                                                       
Query: 350 aggatgcagtgacaacacttcaggaagttctagaggggaagcatgatgaagccatagagg 409
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 65  aggatgcagtgacaacacttcaggaagttctagaggggaagcatgatgaagccatagaag 124

                                                                       
Query: 410 agacactgactaaataccatgttccaacatatagatggtggtccaccctccatcaagtta 469
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 agacactgactaaattccatgttccaacatatagatggtggtccaccctccatcaagtta 184

                                                                       
Query: 470 ttgaaggtcttgatatcttgatcaggttgcctccagacaacattcaacaattagaacctg 529
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ttgaaggtcttgctatcttgatcaggttgcctccagacaacattcaacaattagaacctg 244

                                     
Query: 530 attttgaagggagatcgtttgactaa 555
           |||||||||| ||||| |||||||||
Sbjct: 245 attttgaaggaagatcctttgactaa 270