Miyakogusa Predicted Gene

Lj0g3v0211609.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0211609.1 Non Chatacterized Hit- tr|C5XQY9|C5XQY9_SORBI
Putative uncharacterized protein Sb03g027630
OS=Sorghu,60.81,3e-19,RINGv,Zinc finger, RING-CH-type; PREDICTED
PROTEIN,NULL; MEMBRANE ASSOCIATED RING FINGER,NULL; no
de,NODE_51376_length_471_cov_106.885353.path2.1
         (315 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73011 homologue to UniRef100_A7PL43 Cluster: Chromoso...   624   e-179

>gnl|LJGI|TC73011 homologue to UniRef100_A7PL43 Cluster: Chromosome chr7 scaffold_20,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_20, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (49%)
          Length = 763

 Score =  624 bits (315), Expect = e-179
 Identities = 315/315 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctgatcattcagattcttctcctctcgtccctccccaaccactctctgacgctttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 atggctgatcattcagattcttctcctctcgtccctccccaaccactctctgacgctttc 243

                                                                       
Query: 61  gagatcgacctcgaagctggtccctctgaacaaatccaatgccggatttgtcttgaaact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gagatcgacctcgaagctggtccctctgaacaaatccaatgccggatttgtcttgaaact 303

                                                                       
Query: 121 gatggtcgagattttatagctccatgtaagtgcaaaggcacatcaaaatatgtacatcgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gatggtcgagattttatagctccatgtaagtgcaaaggcacatcaaaatatgtacatcgg 363

                                                                       
Query: 181 gattgtttggatcactggcgagctattaaggaagggtttgcatttgctcactgcactacc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gattgtttggatcactggcgagctattaaggaagggtttgcatttgctcactgcactacc 423

                                                                       
Query: 241 tgcaaggctccttatcatttgcgtgttcatgttgctgctgataggaaatggcgtaccctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tgcaaggctccttatcatttgcgtgttcatgttgctgctgataggaaatggcgtaccctg 483

                          
Query: 301 aaatttcggtttttt 315
           |||||||||||||||
Sbjct: 484 aaatttcggtttttt 498