Miyakogusa Predicted Gene
- Lj0g3v0211359.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0211359.1 tr|A2TJV6|A2TJV6_CUCSA Chloroplast HSP70
OS=Cucumis sativus PE=3 SV=1,86.29,0,Actin-like ATPase domain,NULL;
HSP70,Heat shock protein 70 family; HSP70_1,Heat shock protein 70,
co,CUFF.13606.1
(948 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61294 homologue to UniRef100_Q1SKX2 Cluster: Chaperon... 983 0.0
gnl|LJGI|AW428869 homologue to UniRef100_A2TJV6 Cluster: Chlorop... 226 2e-58
gnl|LJGI|TC81781 homologue to UniRef100_A7PGX4 Cluster: Chromoso... 149 4e-35
gnl|LJGI|DC593310 similar to UniRef100_A7PNK8 Cluster: Chromosom... 60 3e-08
gnl|LJGI|TC69103 similar to UniRef100_Q9M6R1 Cluster: High molec... 58 1e-07
gnl|LJGI|TC64407 homologue to UniRef100_Q53NM9 Cluster: DnaK-typ... 56 4e-07
gnl|LJGI|TC73211 homologue to UniRef100_Q9ATB8 Cluster: BiP-isof... 52 6e-06
>gnl|LJGI|TC61294 homologue to UniRef100_Q1SKX2 Cluster: Chaperone DnaK; n=1;
Medicago truncatula|Rep: Chaperone DnaK - Medicago
truncatula (Barrel medic), partial (26%)
Length = 820
Score = 983 bits (496), Expect = 0.0
Identities = 670/728 (92%)
Strand = Plus / Plus
Query: 1 atggctgctcagatacacggtctcggaacccccattttcaccacaccactcaacaaatcc 60
|||||| ||||||||||| ||||||||||||| |||||||||| ||||||||||| |||
Sbjct: 93 atggcttctcagatacactgtctcggaaccccttttttcaccactccactcaacaagtcc 152
Query: 61 aattcccgaactgttttcttaggccaagcactcacttgtaattacaaaccctttccattt 120
||||||||||| ||||||||||| | |||||||||| ||| |||||||||||||||||
Sbjct: 153 aattcccgaaccgttttcttagggaatgcactcacttcaaatcacaaaccctttccattt 212
Query: 121 ctaaagctcaagaccagtgttaaccacaccaggaggaccaggtcccacactctccgagtc 180
||||||||||| | || ||| |||||||||||||||| ||||| || |||||||||||||
Sbjct: 213 ctaaagctcaacaacaatgtcaaccacaccaggaggagcaggtaccgcactctccgagtc 272
Query: 181 gtcaatgagaaagtcgtcggtatcgatttgggaaccaccaactccgccgtcgccgccatg 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gtcaatgagaaagtcgtcggcatcgatttgggaaccaccaactccgccgtcgccgccatg 332
Query: 241 gagggtggtaaacccaccatcataaccaacgccgagggccagagaaccaccccctccgtc 300
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gagtgtggcaaacccaccatcataaccaacgccgagggccagagaaccaccccctccgtc 392
Query: 301 gtcgcctacaccaaaaacggtgacaggctcgttggtcaaatcgccaagcgtcaggccgtg 360
||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct: 393 gtcgcttacaccaaaaacggcgacagactcgtcggtcaaatcgccaagcgtcaggccgtc 452
Query: 361 gtcaaccctgagaacacttttttctccgtcaagaggttcattgggaggaagatgtccgag 420
||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 453 gtcaaccctgagaacacgtttttctccgtcaagaggttcatcgggaggaagatgtcggag 512
Query: 421 gtcgacgaagagtccaagcaggtctcttacagggtcatcagggacgagaatggcaacgtc 480
|| || |||||||||||||||||||||||||||||||||||||| || |||||||| |||
Sbjct: 513 gtggatgaagagtccaagcaggtctcttacagggtcatcagggatgacaatggcaatgtc 572
Query: 481 aagctcgattgccccgctattggcaagagtttcgctgccgaagaaatctctgctcaggtc 540
|| ||||||||| |||| ||||||||||||||||| || ||||||||||||||||||||
Sbjct: 573 aaactcgattgctccgccattggcaagagtttcgccgctgaagaaatctctgctcaggtt 632
Query: 541 ttgaggaagcttgtagatgatgcttccaagtttttgaatgataaagtcaccaaggcagta 600
||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||
Sbjct: 633 ttgaggaagcttgtagatgatgcttccaagtttttgaatgataaagtgactaaggctgta 692
Query: 601 gttactgtccctgcttacttcaatgattcccaaagaactgctaccaaggatgctggcaag 660
|||||||| ||||| |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 693 gttactgtgcctgcatacttcaatgattcccaaagaactgctaccaaggatgcgggtcgg 752
Query: 661 attgctggtttagaagttcttcgtattatcaatgaacccactgctgcatccttggcttat 720
||||| || |||||||||||||| ||||| |||||||| ||||||||||| |||||||||
Sbjct: 753 attgccggattagaagttcttcggattattaatgaacctactgctgcatcattggcttat 812
Query: 721 ggctttga 728
|| |||||
Sbjct: 813 ggatttga 820
>gnl|LJGI|AW428869 homologue to UniRef100_A2TJV6 Cluster: Chloroplast HSP70; n=1;
Cucumis sativus|Rep: Chloroplast HSP70 - Cucumis sativus
(Cucumber), partial (7%)
Length = 142
Score = 226 bits (114), Expect = 2e-58
Identities = 135/142 (95%)
Strand = Plus / Plus
Query: 766 ggaggtggtacttttgatgtctcagtgcttgaggttggtgatggagtgtttgaagtcttg 825
|||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||
Sbjct: 1 ggaggtggtacttttgatgtatccgtgcttgaggttggtgatggagtgtttgaagtgttg 60
Query: 826 tctacttctggtgatacacacttaggtggtgatgactttgataagagaattgtcgattgg 885
|||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 tctacttccggcgatacacacttaggtggtgatgactttgataagagaattgttgattgg 120
Query: 886 ctggctgcagacttcaagagaa 907
||||||||||| ||||||||||
Sbjct: 121 ctggctgcagatttcaagagaa 142
>gnl|LJGI|TC81781 homologue to UniRef100_A7PGX4 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (50%)
Length = 809
Score = 149 bits (75), Expect = 4e-35
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 872 gaattgtcgattggctggctgcagacttcaagagaaatgaaggtatagaccttttgaaag 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gaattgtcgattggctggctgcagacttcaagagaaatgaaggtatagaccttttgaaag 62
Query: 932 acaaacaagctcttc 946
|||||||||||||||
Sbjct: 63 acaaacaagctcttc 77
>gnl|LJGI|DC593310 similar to UniRef100_A7PNK8 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 546
Score = 60.0 bits (30), Expect = 3e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 751 ttggtatttgaccttggaggtggtacttttgatgtctc 788
||||| ||||||||||| ||||||||||||||||||||
Sbjct: 122 ttggtttttgaccttggtggtggtacttttgatgtctc 159
>gnl|LJGI|TC69103 similar to UniRef100_Q9M6R1 Cluster: High molecular weight heat
shock protein; n=1; Malus x domestica|Rep: High
molecular weight heat shock protein - Malus domestica
(Apple) (Malus sylvestris), partial (25%)
Length = 631
Score = 58.0 bits (29), Expect = 1e-07
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 601 gttactgtccctgcttacttcaatgattc 629
|||||||||||||||||||||||||||||
Sbjct: 577 gttactgtccctgcttacttcaatgattc 605
>gnl|LJGI|TC64407 homologue to UniRef100_Q53NM9 Cluster: DnaK-type molecular
chaperone hsp70-rice; n=1; Oryza sativa Japonica
Group|Rep: DnaK-type molecular chaperone hsp70-rice -
Oryza sativa subsp. japonica (Rice), partial (37%)
Length = 799
Score = 56.0 bits (28), Expect = 4e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 757 tttgaccttggaggtggtacttttgatgtctc 788
||||||||||| ||||||||||||||||||||
Sbjct: 692 tttgaccttggtggtggtacttttgatgtctc 723
>gnl|LJGI|TC73211 homologue to UniRef100_Q9ATB8 Cluster: BiP-isoform D; n=1; Glycine
max|Rep: BiP-isoform D - Glycine max (Soybean), partial
(66%)
Length = 1029
Score = 52.0 bits (26), Expect = 6e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 757 tttgaccttggaggtggtacttttgatgtc 786
||||| ||||||||||||||||||||||||
Sbjct: 727 tttgatcttggaggtggtacttttgatgtc 756