Miyakogusa Predicted Gene

Lj0g3v0211239.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0211239.1 Non Chatacterized Hit- tr|I1LI15|I1LI15_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5941
PE=,79.69,0,ATM-RELATED,NULL; ATAXIA TELANGIECTASIA MUTATED
(ATM)-RELATED,NULL; ARM repeat,Armadillo-type fold; ,CUFF.13571.1
         (4038 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79791 similar to UniRef100_A7QDY4 Cluster: Chromosome...   357   4e-97

>gnl|LJGI|TC79791 similar to UniRef100_A7QDY4 Cluster: Chromosome chr4 scaffold_83,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_83, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (3%)
          Length = 847

 Score =  357 bits (180), Expect = 4e-97
 Identities = 312/356 (87%)
 Strand = Plus / Plus

                                                                       
Query: 8   ctgttcgggatttcgagcagcattcccgtcaactcgtcgatcccaacctcgagattcagg 67
           |||||| | |||||||||||||||| ||||| |||||||||||| ||||| |||||||||
Sbjct: 212 ctgttcagaatttcgagcagcattctcgtcatctcgtcgatcccgacctccagattcagg 271

                                                                       
Query: 68  agaggctgcagatggtgatggaggttaggggtagtcttgggatggctaacactcctgagt 127
            ||||||||||||||||||||||||||||| |||||||| ||| ||  ||||  ||||||
Sbjct: 272 cgaggctgcagatggtgatggaggttagggatagtcttgagattgcacacacagctgagt 331

                                                                       
Query: 128 acttgaattttttcaagtgttacttccaggcgttctctgcgatactgctgcaaattacga 187
           |||||||||| || ||||||||||||| ||||||||||||| | ||||||||||| ||||
Sbjct: 332 acttgaatttcttaaagtgttacttccgggcgttctctgcggtgctgctgcaaatcacga 391

                                                                       
Query: 188 agccgcagtttatagacaatcccgagcacaagcttcggaataccgtggttaagatgttgt 247
           |||||||||||   |||||||||||||||||||||| ||||| ||||||| |||| ||| 
Sbjct: 392 agccgcagtttgaggacaatcccgagcacaagcttcagaatatcgtggttgagatattga 451

                                                                       
Query: 248 atagactgccgcaaagggaagttctccaaccttttgcgctggacctcttgaaggtttcta 307
           |||| || ||| | || ||||||||||  |||||||  | |||||||||||||||| |||
Sbjct: 452 ataggcttccgtacagcgaagttctccggccttttgtacaggacctcttgaaggttgcta 511

                                                                   
Query: 308 tgcaagtgcttaccacagacaatgaagagaatggcttaatttgtatccgtataatc 363
           ||||||||||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 512 tgcaagtgcttacgacggacaatgaggagaatgggttgatttgtatccgtataatc 567