Miyakogusa Predicted Gene

Lj0g3v0210699.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0210699.1 tr|B9MZV3|B9MZV3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_595599 PE=4
SV=1,58.42,2e-17,seg,NULL,CUFF.13534.1
         (1045 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71634 similar to UniRef100_Q197W8 Cluster: TANGLED; n...   747   0.0  

>gnl|LJGI|TC71634 similar to UniRef100_Q197W8 Cluster: TANGLED; n=1; Arabidopsis
            thaliana|Rep: TANGLED - Arabidopsis thaliana (Mouse-ear
            cress), partial (10%)
          Length = 486

 Score =  747 bits (377), Expect = 0.0
 Identities = 377/377 (100%)
 Strand = Plus / Plus

                                                                        
Query: 669  aagcccacgggctccgtctatttccccctcaaggcctgcaagtttcagcaggagttcccc 728
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5    aagcccacgggctccgtctatttccccctcaaggcctgcaagtttcagcaggagttcccc 64

                                                                        
Query: 729  tacaagaatcagaggaaccccacataagtttttgatcaagtctccaactttaacctccaa 788
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65   tacaagaatcagaggaaccccacataagtttttgatcaagtctccaactttaacctccaa 124

                                                                        
Query: 789  aatacaagtcagaagcccacgggctctgtccatttcacccataagacctgcaaatttggg 848
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125  aatacaagtcagaagcccacgggctctgtccatttcacccataagacctgcaaatttggg 184

                                                                        
Query: 849  taggaattctcagaagagatcagctgcgtctaatttcagacgatcattctctccttcaag 908
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185  taggaattctcagaagagatcagctgcgtctaatttcagacgatcattctctccttcaag 244

                                                                        
Query: 909  aatagcaagcagattggcttcactttcaccattgaagaggaagaaaactgtacagaaaag 968
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245  aatagcaagcagattggcttcactttcaccattgaagaggaagaaaactgtacagaaaag 304

                                                                        
Query: 969  tgatgggttgtttgtgagtggactgaagcagcgtccagcatcaacagtgcgattgaacac 1028
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305  tgatgggttgtttgtgagtggactgaagcagcgtccagcatcaacagtgcgattgaacac 364

                             
Query: 1029 tgtccgaagagtttgag 1045
            |||||||||||||||||
Sbjct: 365  tgtccgaagagtttgag 381



 Score =  115 bits (58), Expect = 6e-25
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                       
Query: 582 gagttcccctacaagaaatagaggaaccccacataagtttttgatcaaatctccaacttt 641
           |||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 56  gagttcccctacaagaatcagaggaaccccacataagtttttgatcaagtctccaacttt 115

                     
Query: 642 aacctccaaa 651
           ||||||||||
Sbjct: 116 aacctccaaa 125