Miyakogusa Predicted Gene

Lj0g3v0210389.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0210389.1 Non Chatacterized Hit- tr|I1MB74|I1MB74_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.3265
PE=,55.56,0.00002,DUF1296,Protein of unknown function
DUF1296,CUFF.13504.1
         (309 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64996 homologue to UniRef100_Q1W376 Cluster: Phosphom...    72   2e-12
gnl|LJGI|AV406715 weakly similar to UniRef100_A7Q2X5 Cluster: Ch...    54   5e-07
gnl|LJGI|TC71256 weakly similar to UniRef100_A7Q2X5 Cluster: Chr...    54   5e-07

>gnl|LJGI|TC64996 homologue to UniRef100_Q1W376 Cluster: Phosphomannomutase; n=1;
           Glycine max|Rep: Phosphomannomutase - Glycine max
           (Soybean), complete
          Length = 1060

 Score = 71.9 bits (36), Expect = 2e-12
 Identities = 73/85 (85%), Gaps = 4/85 (4%)
 Strand = Plus / Plus

                                                                       
Query: 220 accaatcctgaagatactatgaagcagtgtaagtctttgttcc----aagttaagtattt 275
           |||| ||||||||| ||||| ||||||||||| ||||||||||    |||||||| ||||
Sbjct: 767 accagtcctgaagacactatcaagcagtgtaaatctttgttcctagaaagttaagaattt 826

                                    
Query: 276 tccacagctacgtgttactgagaag 300
           | |||||| || |||||||||||||
Sbjct: 827 ttcacagcaacatgttactgagaag 851


>gnl|LJGI|AV406715 weakly similar to UniRef100_A7Q2X5 Cluster: Chromosome chr12
           scaffold_47, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_47, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (5%)
          Length = 405

 Score = 54.0 bits (27), Expect = 5e-07
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                       
Query: 64  agcggtggtgggttgagggttttgatttcgaacagtgtgcggaagaccatccagaacatc 123
           |||||||| ||||| |||| ||  ||| |||||||||||  |||||| ||||||||||||
Sbjct: 274 agcggtggcgggtttagggcttcaattccgaacagtgtgaagaagacgatccagaacatc 333

                  
Query: 124 aaggaga 130
           || ||||
Sbjct: 334 aaagaga 340


>gnl|LJGI|TC71256 weakly similar to UniRef100_A7Q2X5 Cluster: Chromosome chr12
           scaffold_47, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_47, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (14%)
          Length = 904

 Score = 54.0 bits (27), Expect = 5e-07
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                       
Query: 64  agcggtggtgggttgagggttttgatttcgaacagtgtgcggaagaccatccagaacatc 123
           |||||||| ||||| |||| ||  ||| |||||||||||  |||||| ||||||||||||
Sbjct: 197 agcggtggcgggtttagggcttcaattccgaacagtgtgaagaagacgatccagaacatc 256

                  
Query: 124 aaggaga 130
           || ||||
Sbjct: 257 aaagaga 263