Miyakogusa Predicted Gene
- Lj0g3v0210329.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0210329.1 tr|F2CSI2|F2CSI2_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,40.24,1e-17,seg,NULL; no
description,NULL; SUBFAMILY NOT NAMED,NULL; FAS-ASSOCIATED
PROTEIN,NULL,CUFF.13501.1
(579 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59057 similar to UniRef100_A7QJ86 Cluster: Chromosome... 607 e-173
>gnl|LJGI|TC59057 similar to UniRef100_A7QJ86 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 819
Score = 607 bits (306), Expect = e-173
Identities = 306/306 (100%)
Strand = Plus / Plus
Query: 178 aacgacgtcactgagcatctccttcaaccagaacaaccgccaccgcctcctcccggtctg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aacgacgtcactgagcatctccttcaaccagaacaaccgccaccgcctcctcccggtctg 455
Query: 238 gcatggaagctcatcaagttacccgtctccgtcatttctggcagcctagggttagtttcc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gcatggaagctcatcaagttacccgtctccgtcatttctggcagcctagggttagtttcc 515
Query: 298 ggcgccatcgggttaggcctttgggccgccggcggtgttctctcttactccttgggattc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ggcgccatcgggttaggcctttgggccgccggcggtgttctctcttactccttgggattc 575
Query: 358 atgggcttaggcggcggcgggggctcgggctccggcgcgtcgtcctccggttcggcgccg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 atgggcttaggcggcggcgggggctcgggctccggcgcgtcgtcctccggttcggcgccg 635
Query: 418 atgctttcggcgacgtcggaagcgatggattttgtggcggcgtttgagcgggattacggg 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 atgctttcggcgacgtcggaagcgatggattttgtggcggcgtttgagcgggattacggg 695
Query: 478 tcggtg 483
||||||
Sbjct: 696 tcggtg 701
Score = 242 bits (122), Expect = 2e-63
Identities = 122/122 (100%)
Strand = Plus / Plus
Query: 1 atggcagatgtagcagataaattggcgtatttccaagcgatcaccggtttggaagatccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 atggcagatgtagcagataaattggcgtatttccaagcgatcaccggtttggaagatccc 278
Query: 61 gacctctgcaccgagatcctcgccgcccatggctgggacctcgaactcgccatctcctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gacctctgcaccgagatcctcgccgcccatggctgggacctcgaactcgccatctcctcc 338
Query: 121 tt 122
||
Sbjct: 339 tt 340
Score = 153 bits (77), Expect = 1e-36
Identities = 89/93 (95%)
Strand = Plus / Plus
Query: 487 gcgcggcgtccgccgtttcggcgccgatgttttcggcgacgtcggaagcgatggattttg 546
||||| ||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 610 gcgcgtcgtcctccggttcggcgccgatgctttcggcgacgtcggaagcgatggattttg 669
Query: 547 tggcggcgtttgagcgggattacgggtcggtga 579
|||||||||||||||||||||||||||||||||
Sbjct: 670 tggcggcgtttgagcgggattacgggtcggtga 702