Miyakogusa Predicted Gene
- Lj0g3v0210039.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0210039.1 Non Chatacterized Hit- tr|B9SU07|B9SU07_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,33.33,2e-18,Mitochondrial termination factor repeats,Mitochodrial
transcription termination factor-related;
mTER,NODE_68822_length_1353_cov_17.804878.path1.1
(1104 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72488 1098 0.0
gnl|LJGI|TC82521 similar to UniRef100_Q6V4T2 Cluster: TnpA C-ter... 739 0.0
gnl|LJGI|TC77615 weakly similar to UniRef100_A7NW61 Cluster: Chr... 549 e-155
gnl|LJGI|AV765169 weakly similar to UniRef100_A7NW61 Cluster: Ch... 222 4e-57
gnl|LJGI|TC79714 weakly similar to UniRef100_A7PTX3 Cluster: Chr... 100 4e-20
gnl|LJGI|GO024260 weakly similar to UniRef100_A7NW61 Cluster: Ch... 90 3e-17
gnl|LJGI|TC80892 weakly similar to UniRef100_A7NW61 Cluster: Chr... 66 5e-10
gnl|LJGI|TC74522 64 2e-09
gnl|LJGI|BW631473 weakly similar to UniRef100_A7NW61 Cluster: Ch... 62 8e-09
gnl|LJGI|TC72620 similar to UniRef100_Q9MAW6 Cluster: 60S riboso... 58 1e-07
>gnl|LJGI|TC72488
Length = 631
Score = 1098 bits (554), Expect = 0.0
Identities = 557/558 (99%)
Strand = Plus / Plus
Query: 1 atgattcactgtcaccgcgtaagagctcttctctcccaactctcatcaaaattttcacat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 74 atgattcactgtcaccgcgtaagagctcttctctcccaactctcatcaaaatgttcacat 133
Query: 61 tctctgcaaccaatctctcacaaaatcttcttctcaaccacttcagaacaatctttcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tctctgcaaccaatctctcacaaaatcttcttctcaaccacttcagaacaatctttcacc 193
Query: 121 acatcctacctcacacaacactgtggtttcacaccacaatcagctctaaaagcttctaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 acatcctacctcacacaacactgtggtttcacaccacaatcagctctaaaagcttctaag 253
Query: 181 cgcgttcgtttcgacaccgcgaagaagcccgaatcagtcatcgccttcttccaacaacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 cgcgttcgtttcgacaccgcgaagaagcccgaatcagtcatcgccttcttccaacaacat 313
Query: 241 ggtttctcaccctcccagattcagagcatcttaattagggcaccagagcttcttacttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ggtttctcaccctcccagattcagagcatcttaattagggcaccagagcttcttacttgt 373
Query: 301 gaccccatcaaaagggtattgccaaagtttcaatttctagcctccaaaggtgcttctacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gaccccatcaaaagggtattgccaaagtttcaatttctagcctccaaaggtgcttctacc 433
Query: 361 cacgacatcgttaccacggtgactcggagtccagggtttctgcgtacaagccttgagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cacgacatcgttaccacggtgactcggagtccagggtttctgcgtacaagccttgagaag 493
Query: 421 cacataatccctgcttatgaattggtaaggagattctgtccttctgatgcaaaggcaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 cacataatccctgcttatgaattggtaaggagattctgtccttctgatgcaaaggcaatt 553
Query: 481 tcttgtgtaattgtttgtcctaattccattggcgatgctcgcgttcagcataatgtgaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tcttgtgtaattgtttgtcctaattccattggcgatgctcgcgttcagcataatgtgaaa 613
Query: 541 ttgctgcttgatgttgga 558
||||||||||||||||||
Sbjct: 614 ttgctgcttgatgttgga 631
>gnl|LJGI|TC82521 similar to UniRef100_Q6V4T2 Cluster: TnpA C-terminal; n=1;
Enterococcus faecium|Rep: TnpA C-terminal - Enterococcus
faecium (Streptococcus faecium), partial (18%)
Length = 484
Score = 739 bits (373), Expect = 0.0
Identities = 386/389 (99%), Gaps = 1/389 (0%)
Strand = Plus / Plus
Query: 1 atgattcactgtcaccgc-gtaagagctcttctctcccaactctcatcaaaattttcaca 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 96 atgattcactgtcaccgcagtaagagctcttctctcccaactctcatcaaaatgttcaca 155
Query: 60 ttctctgcaaccaatctctcacaaaatcttcttctcaaccacttcagaacaatctttcac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ttctctgcaaccaatctctcacaaaatcttcttctcaaccacttcagaacaatctttcac 215
Query: 120 cacatcctacctcacacaacactgtggtttcacaccacaatcagctctaaaagcttctaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 cacatcctacctcacacaacactgtggtttcacaccacaatcagctctaaaagcttctaa 275
Query: 180 gcgcgttcgtttcgacaccgcgaagaagcccgaatcagtcatcgccttcttccaacaaca 239
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 276 gcgcgttcgtttcgacaccgcgaagaagcccgaatcaatcatcgccttcttccaacaaca 335
Query: 240 tggtttctcaccctcccagattcagagcatcttaattagggcaccagagcttcttacttg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tggtttctcaccctcccagattcagagcatcttaattagggcaccagagcttcttacttg 395
Query: 300 tgaccccatcaaaagggtattgccaaagtttcaatttctagcctccaaaggtgcttctac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tgaccccatcaaaagggtattgccaaagtttcaatttctagcctccaaaggtgcttctac 455
Query: 360 ccacgacatcgttaccacggtgactcgga 388
|||||||||||||||||||||||||||||
Sbjct: 456 ccacgacatcgttaccacggtgactcgga 484
>gnl|LJGI|TC77615 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 482
Score = 549 bits (277), Expect = e-155
Identities = 293/297 (98%), Gaps = 1/297 (0%)
Strand = Plus / Plus
Query: 809 tgcttaggtctaaggagaaactcaatgcagtgatgagtttttgggtcagccagcttgggt 868
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 tgcttaggtctaaggagaaactcaatccagtgatgagtttttgggtcagccagcttgggt 60
Query: 869 gggattcttcaacacttctagcatcaccaataatttttggatttagtttggagacaagga 928
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 61 gggattcttcaacacttctagcatcacccatcatttttggatttagtttggagacaagga 120
Query: 929 ttgttccaagggcttcagttgttcagtatcttctctctaaaggtttgatgaagaaaggtg 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgttccaagggcttcagttgttcagtatcttctctctaaaggtttgatgaagaaaggtg 180
Query: 989 ctagtttagttacacctttttgtttgactgataagttgttcctgcagaagtttgttacat 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctagtttagttacacctttttgtttgactgataagttgttcctgcagaagtttgttacat 240
Query: 1049 gttttgagaagggggaaacat-ctaggctattgaagctatatcagggaggctcctag 1104
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 241 gttttgagaagggggaaacatactaggctattgaagctatatcagggaggctcctag 297
>gnl|LJGI|AV765169 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 573
Score = 222 bits (112), Expect = 4e-57
Identities = 247/292 (84%)
Strand = Plus / Minus
Query: 785 catttaagaggcaaccaagctttatgcttaggtctaaggagaaactcaatgcagtgatga 844
|||||| ||||||||| ||| ||||| | ||||||| ||||||||||||||||||||||
Sbjct: 517 catttaggaggcaacccagcattatgttaaggtctactgagaaactcaatgcagtgatga 458
Query: 845 gtttttgggtcagccagcttgggtgggattcttcaacacttctagcatcaccaataattt 904
||| ||||| |||||||| |||||| |||| | |||||||| |||| ||||| |
Sbjct: 457 atttgtgggttgatcagcttggttgggatacttcggcgcttctagctgcaccgataatat 398
Query: 905 ttggatttagtttggagacaaggattgttccaagggcttcagttgttcagtatcttctct 964
|||||| ||| ||||||| |||||| ||||||||||||||||||| ||||||||||||
Sbjct: 397 ttggatatagcttggagaagaggattattccaagggcttcagttgtcaagtatcttctct 338
Query: 965 ctaaaggtttgatgaagaaaggtgctagtttagttacacctttttgtttgactgataagt 1024
||||||||||||||||||| | ||||| ||| |||||| ||| ||||||||||| ||
Sbjct: 337 ctaaaggtttgatgaagaaggaagctagcttaactacaccatttggtttgactgatgagc 278
Query: 1025 tgttcctgcagaagtttgttacatgttttgagaagggggaaacatctaggct 1076
|||||||||| ||||| || | ||||||||||||| |||||||||||||||
Sbjct: 277 tgttcctgcaaaagttcgtgaactgttttgagaaggaggaaacatctaggct 226
>gnl|LJGI|TC79714 weakly similar to UniRef100_A7PTX3 Cluster: Chromosome chr7
scaffold_31, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr7 scaffold_31, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 1406
Score = 99.6 bits (50), Expect = 4e-20
Identities = 197/246 (80%)
Strand = Plus / Plus
Query: 832 aatgcagtgatgagtttttgggtcagccagcttgggtgggattcttcaacacttctagca 891
|||||||||||||||||||||||| ||| ||||| ||||| ||||| ||||||||
Sbjct: 924 aatgcagtgatgagtttttgggtcgtccatcttggttgggacccttcagtgcttctagcc 983
Query: 892 tcaccaataatttttggatttagtttggagacaaggattgttccaagggcttcagttgtt 951
|||| | ||||| ||| |||||||||| |||| || | |||||||||||||||||
Sbjct: 984 gtgccaacacttttttcattaagtttggagaaaaggcttatcccaagggcttcagttgtc 1043
Query: 952 cagtatcttctctctaaaggtttgatgaagaaaggtgctagtttagttacacctttttgt 1011
|||||||||||||| | ||| ||||||||||| | |||||| ||| |||||| |||
Sbjct: 1044 cagtatcttctctccagaggattgatgaagaaggatgctagcttaagtacaccatttata 1103
Query: 1012 ttgactgataagttgttcctgcagaagtttgttacatgttttgagaagggggaaacatct 1071
| ||||| ||| |||||| ||| || ||||| | ||||||||| ||| |||| |||||
Sbjct: 1104 tgtactgacaagctgttccagcaaaaatttgtgaattgttttgaggaggaggaagcatct 1163
Query: 1072 aggcta 1077
| ||||
Sbjct: 1164 aagcta 1169
Score = 75.8 bits (38), Expect = 5e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 282 accagagcttcttacttgtgaccccatcaaaagggtattgccaaagtttcaatttctagc 341
||||||||||||||| || |||||| ||||||||| ||||| ||||||||||| ||||
Sbjct: 383 accagagcttcttacatgcaaccccaccaaaagggttttgcctaagtttcaattcttagc 442
Query: 342 ctccaaaggt 351
||||||||||
Sbjct: 443 ctccaaaggt 452
>gnl|LJGI|GO024260 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 544
Score = 89.7 bits (45), Expect = 3e-17
Identities = 132/161 (81%)
Strand = Plus / Plus
Query: 832 aatgcagtgatgagtttttgggtcagccagcttgggtgggattcttcaacacttctagca 891
|||||||||||||||||||||||| ||| ||||| ||||| ||||| ||||||||
Sbjct: 325 aatgcagtgatgagtttttgggtcggccgtcttggttgggacccttcagtgcttctagcc 384
Query: 892 tcaccaataatttttggatttagtttggagacaaggattgttccaagggcttcagttgtt 951
||| | ||||| ||| |||||||||| |||| || | |||||||||||||||||
Sbjct: 385 gtgccatcacttttttcattaagtttggagaaaaggcttatcccaagggcttcagttgtc 444
Query: 952 cagtatcttctctctaaaggtttgatgaagaaaggtgctag 992
|||||||||||||| | ||| ||||||||||| | ||||||
Sbjct: 445 cagtatcttctctccagaggattgatgaagaaggatgctag 485
>gnl|LJGI|TC80892 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 488
Score = 65.9 bits (33), Expect = 5e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 320 tgccaaagtttcaatttctagcctccaaaggtgcttc 356
|||| ||||||||||||||||||||||||||||||||
Sbjct: 343 tgcccaagtttcaatttctagcctccaaaggtgcttc 379
>gnl|LJGI|TC74522
Length = 468
Score = 63.9 bits (32), Expect = 2e-09
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 325 aagtttcaatttctagcctccaaaggtgcttctacccacgacat 368
|||||||| ||| |||||||||||||||||||||| ||||||||
Sbjct: 390 aagtttcattttttagcctccaaaggtgcttctactcacgacat 347
>gnl|LJGI|BW631473 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 475
Score = 61.9 bits (31), Expect = 8e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 301 gaccccatcaaaagggtattgccaaagtttcaatttctagcctccaa 347
||||||| || |||||| ||||| |||||||||||||||||||||||
Sbjct: 356 gaccccaccataagggttttgcccaagtttcaatttctagcctccaa 402
Score = 52.0 bits (26), Expect = 8e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 178 aagcgcgttcgtttcgacaccgcgaagaagcccgaatcagtcatcgccttcttc 231
||||| ||||||||||||||||| ||||||| || ||||| || |||||||||
Sbjct: 233 aagcgagttcgtttcgacaccgcagagaagcctgattcagttattgccttcttc 286
>gnl|LJGI|TC72620 similar to UniRef100_Q9MAW6 Cluster: 60S ribosomal protein L27a;
n=1; Panax ginseng|Rep: 60S ribosomal protein L27a -
Panax ginseng (Korean ginseng), partial (22%)
Length = 887
Score = 58.0 bits (29), Expect = 1e-07
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 332 aatttctagcctccaaaggtgcttctacccacgacat 368
||||| |||||||||||||||||||||| ||||||||
Sbjct: 537 aatttttagcctccaaaggtgcttctactcacgacat 501