Miyakogusa Predicted Gene

Lj0g3v0210009.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0210009.1 tr|Q0WP75|Q0WP75_ARATH Kinesin like protein
(Fragment) OS=Arabidopsis thaliana GN=At4g05190 PE=2
SV=,58.33,5e-19,coiled-coil,NULL,CUFF.13474.1
         (282 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72724 weakly similar to UniRef100_A7P105 Cluster: Chr...   236   6e-62

>gnl|LJGI|TC72724 weakly similar to UniRef100_A7P105 Cluster: Chromosome chr19
           scaffold_4, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (6%)
          Length = 1381

 Score =  236 bits (119), Expect = 6e-62
 Identities = 146/155 (94%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagtctacaacagtacaatagtcgccttcagtcagatcttgaaacaactaatgaggca 60
           |||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 533 atgagtctgcaacagtacaatagttgccttcagtcatatcttgaaacaactaatgaggca 592

                                                                       
Query: 61  cataaacgactagaaacagagaaatcaactattgttgagaaccttagcaatgtaagaggg 120
           ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 cataaacaactagaaacagtgaaatcaactattgttgagaaccttagcaatgtaagaggg 652

                                              
Query: 121 cacaataaggcattgcaggagcagttgtcatctct 155
           | | |||||||||||||||||| |||||| |||||
Sbjct: 653 cgcgataaggcattgcaggagcggttgtcgtctct 687