Miyakogusa Predicted Gene

Lj0g3v0209829.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0209829.1 CUFF.13455.1
         (615 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV764694 similar to UniRef100_Q70DJ9 Cluster: Calcium b...   688   0.0  
gnl|LJGI|AV422015 similar to UniRef100_A7P3U1 Cluster: Chromosom...   379   e-104
gnl|LJGI|TC78927 weakly similar to UniRef100_A7P3U1 Cluster: Chr...    76   3e-13

>gnl|LJGI|AV764694 similar to UniRef100_Q70DJ9 Cluster: Calcium binding protein; n=1;
           Fagus sylvatica|Rep: Calcium binding protein - Fagus
           sylvatica (Beechnut), partial (47%)
          Length = 571

 Score =  688 bits (347), Expect = 0.0
 Identities = 353/355 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttcctcgtcttctactacaaaagagggaaataatcaagagggaatagttggtgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 atggcttcctcgtcttctactacaaaagagggaaataatcaagagggaatagttggtgag 276

                                                                       
Query: 61  aaaccaataccatatgatcaaaacgttctgcaaaagcacgttgcattctttgacaggaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aaaccaataccatatgatcaaaacgttctgcaaaagcacgttgcattctttgacaggaac 336

                                                                       
Query: 121 catgacggcatcatctacccatgggaaactttccaaggatttcgtgcaataggttgtgga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 catgacggcatcatctacccatgggaaactttccaaggatttcgtgcaataggttgtgga 396

                                                                       
Query: 181 atgccgttgtcgattggtggtgctattttcattaatgttggtctcagccaaaaaactcgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 atgccgttgtcgattggtggtgctattttcattaatgttggtctcagccaaaaaactcgt 456

                                                                       
Query: 241 ccgggcaagtttccttctatattggcgccaatagaagttaaaaacatccaaaaagctaaa 300
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 457 ccgggcaagtttccttctatattggcgccaatagaaggtaaaaacatccaaaaagctaaa 516

                                                                  
Query: 301 catggaagtgactctggggtctatgatagcgaaggaaggtttgttccttcaaaat 355
           ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 517 catggaagtgactctggggtctatgatagcgaaggaagggttgttccttcaaaat 571


>gnl|LJGI|AV422015 similar to UniRef100_A7P3U1 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (24%)
          Length = 442

 Score =  379 bits (191), Expect = e-104
 Identities = 200/203 (98%)
 Strand = Plus / Minus

                                                                       
Query: 413 aattgatggagttgctgagggcaaatagagatcctaaggattacggaggatggcttgcta 472
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aattgatggagttgctgagggcaaatagagatcctaaggattacggaggatggcttgcta 383

                                                                       
Query: 473 gctacacagagtggaaaatcttatatgttcttggaaaagacaaggatggtttgctgcaaa 532
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gctacacagagtggaaaatcttatatgttcttggaaaagacaaggatggtttgctgcaaa 323

                                                                       
Query: 533 aagaaactgttcgaggtgtttatgatggaagcctgtttgaacaaatggaaaaggaacaca 592
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 322 aagaaactgttcgaggtgtttatgatggaagcctgtttgaacaaatggtaaaggaacaca 263

                                  
Query: 593 aacaaaagaaacaaaattaaata 615
           ||||  |||||||||||||||||
Sbjct: 262 aacattagaaacaaaattaaata 240


>gnl|LJGI|TC78927 weakly similar to UniRef100_A7P3U1 Cluster: Chromosome chr1
           scaffold_5, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (81%)
          Length = 720

 Score = 75.8 bits (38), Expect = 3e-13
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                             
Query: 331 gaaggaaggtttgttccttcaaaatttgaagaaattttcagcaagcatgc 380
           |||||||||||||||||||| ||||||||||||||||||| ||| |||||
Sbjct: 299 gaaggaaggtttgttccttccaaatttgaagaaattttcaacaaacatgc 348



 Score = 60.0 bits (30), Expect = 2e-08
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                       
Query: 508 aaagacaaggatggtttgctgcaaaaagaaactgttcgaggtgtttatgatggaagcctg 567
           ||||||||| ||| |||  |||| ||||||||| | ||||| ||||||||||||||| ||
Sbjct: 476 aaagacaagaatgatttagtgcagaaagaaactatccgaggcgtttatgatggaagcttg 535

                 
Query: 568 tttgaa 573
           ||||||
Sbjct: 536 tttgaa 541