Miyakogusa Predicted Gene
- Lj0g3v0209329.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0209329.1 Non Chatacterized Hit- tr|I1KH27|I1KH27_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2711
PE=,95.31,0,seg,NULL; no description,NULL; DEAD,DNA/RNA helicase,
DEAD/DEAH box type, N-terminal; Helicase_C,Hel,CUFF.13453.1
(1281 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58050 homologue to UniRef100_Q9LFN6 Cluster: DEAD-box... 2539 0.0
gnl|LJGI|FS329420 homologue to UniRef100_A7QIQ3 Cluster: Chromos... 908 0.0
gnl|LJGI|FS325491 homologue to UniRef100_A7QIQ3 Cluster: Chromos... 819 0.0
gnl|LJGI|TC78076 homologue to UniRef100_A9SV98 Cluster: Predicte... 244 1e-63
gnl|LJGI|TC70039 similar to UniRef100_Q0JM17 Cluster: DEAD-box A... 143 3e-33
gnl|LJGI|TC63543 similar to UniRef100_Q0JM17 Cluster: DEAD-box A... 141 1e-32
>gnl|LJGI|TC58050 homologue to UniRef100_Q9LFN6 Cluster: DEAD-box ATP-dependent RNA
helicase 56; n=1; Arabidopsis thaliana|Rep: DEAD-box
ATP-dependent RNA helicase 56 - Arabidopsis thaliana
(Mouse-ear cress), partial (98%)
Length = 1731
Score = 2539 bits (1281), Expect = 0.0
Identities = 1281/1281 (100%)
Strand = Plus / Plus
Query: 1 atgggtgaattgaaagacactgaggcttacgaggaagaactcatcgattatgaggaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 atgggtgaattgaaagacactgaggcttacgaggaagaactcatcgattatgaggaagaa 148
Query: 61 gatgaaaaagcccctgattctgccaagcccgcggctgaaacagccaaaaagggttatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gatgaaaaagcccctgattctgccaagcccgcggctgaaacagccaaaaagggttatgtt 208
Query: 121 ggtatacatagttcgggatttcgcgacttcctgttgaaaccagagcttcttcgagctatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ggtatacatagttcgggatttcgcgacttcctgttgaaaccagagcttcttcgagctatt 268
Query: 181 gtagattctggatttgagcatccttcagaagtgcaacatgaatgcatccctcaagcaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gtagattctggatttgagcatccttcagaagtgcaacatgaatgcatccctcaagcaatt 328
Query: 241 ttaggaatggatgttatctgccaagcaaaatctgggatgggaaagactgctgtgtttgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttaggaatggatgttatctgccaagcaaaatctgggatgggaaagactgctgtgtttgtt 388
Query: 301 ctgtcatcacttcagcaaattgatcctgttcctggtcaagttgcggcccttgttctttgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ctgtcatcacttcagcaaattgatcctgttcctggtcaagttgcggcccttgttctttgc 448
Query: 361 cacacgagggaactagcttatcagatttgccatgaatttgagaggttcagcacatatctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cacacgagggaactagcttatcagatttgccatgaatttgagaggttcagcacatatctt 508
Query: 421 cctgatataaaagttgctgttttctatggaggtgtcaatatcaaggttcacaaagaattg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 cctgatataaaagttgctgttttctatggaggtgtcaatatcaaggttcacaaagaattg 568
Query: 481 ctcaagaatgaatgtccccatattgttgttggaacacctgggaggattcttgctctgact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ctcaagaatgaatgtccccatattgttgttggaacacctgggaggattcttgctctgact 628
Query: 541 agagacaaggaccttggtttgaagaatgtgaggcattttatacttgatgagtgcgacaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 agagacaaggaccttggtttgaagaatgtgaggcattttatacttgatgagtgcgacaag 688
Query: 601 atgcttgaatcacttgatatgagaagagatgtgcaagagattttcaaattgactccccat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 atgcttgaatcacttgatatgagaagagatgtgcaagagattttcaaattgactccccat 748
Query: 661 gataaacaagtgatgatgttttcagctacactcagcaaagagatacgacctgtttgcaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 gataaacaagtgatgatgttttcagctacactcagcaaagagatacgacctgtttgcaag 808
Query: 721 aagtttatgcaagatcccatggaaatatatgttgatgatgaggccaagttgaccctccat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 aagtttatgcaagatcccatggaaatatatgttgatgatgaggccaagttgaccctccat 868
Query: 781 ggtcttgttcagcactatatcaaattgcaagattcagagaagaatcgtaagttgaatgat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 ggtcttgttcagcactatatcaaattgcaagattcagagaagaatcgtaagttgaatgat 928
Query: 841 cttcttgatgctcttgacttcaaccaagttgttatttttgtcaagagtgtaagcagagca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 cttcttgatgctcttgacttcaaccaagttgttatttttgtcaagagtgtaagcagagca 988
Query: 901 gcagaattgaacaagttgcttgtggagtgtaatttcccgtcaatctgcatacattctgga 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 gcagaattgaacaagttgcttgtggagtgtaatttcccgtcaatctgcatacattctgga 1048
Query: 961 atgtcacaggaagaaaggttgaaacgatacaaaggtttcaaagaggggaagcaaaggatt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 atgtcacaggaagaaaggttgaaacgatacaaaggtttcaaagaggggaagcaaaggatt 1108
Query: 1021 cttgtggcaacagatttagtaggaagggggattgatatagaacgtgttaatatagtcata 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1109 cttgtggcaacagatttagtaggaagggggattgatatagaacgtgttaatatagtcata 1168
Query: 1081 aactatgacatgcctgattctgctgatacttatctacacagggttggaagagctggcaga 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1169 aactatgacatgcctgattctgctgatacttatctacacagggttggaagagctggcaga 1228
Query: 1141 tttgggaccaaggggcttgcaattacttttgtgtcttcttccggtgattctgaagttctt 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1229 tttgggaccaaggggcttgcaattacttttgtgtcttcttccggtgattctgaagttctt 1288
Query: 1201 aatcaggtgcaatctcggtttgaggttgatataaaggagcttcctgaacaaattgacact 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1289 aatcaggtgcaatctcggtttgaggttgatataaaggagcttcctgaacaaattgacact 1348
Query: 1261 gccacatatatgccaaactga 1281
|||||||||||||||||||||
Sbjct: 1349 gccacatatatgccaaactga 1369
>gnl|LJGI|FS329420 homologue to UniRef100_A7QIQ3 Cluster: Chromosome chr9
scaffold_104, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_104, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (34%)
Length = 627
Score = 908 bits (458), Expect = 0.0
Identities = 458/458 (100%)
Strand = Plus / Plus
Query: 1 atgggtgaattgaaagacactgaggcttacgaggaagaactcatcgattatgaggaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 atgggtgaattgaaagacactgaggcttacgaggaagaactcatcgattatgaggaagaa 229
Query: 61 gatgaaaaagcccctgattctgccaagcccgcggctgaaacagccaaaaagggttatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gatgaaaaagcccctgattctgccaagcccgcggctgaaacagccaaaaagggttatgtt 289
Query: 121 ggtatacatagttcgggatttcgcgacttcctgttgaaaccagagcttcttcgagctatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ggtatacatagttcgggatttcgcgacttcctgttgaaaccagagcttcttcgagctatt 349
Query: 181 gtagattctggatttgagcatccttcagaagtgcaacatgaatgcatccctcaagcaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gtagattctggatttgagcatccttcagaagtgcaacatgaatgcatccctcaagcaatt 409
Query: 241 ttaggaatggatgttatctgccaagcaaaatctgggatgggaaagactgctgtgtttgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ttaggaatggatgttatctgccaagcaaaatctgggatgggaaagactgctgtgtttgtt 469
Query: 301 ctgtcatcacttcagcaaattgatcctgttcctggtcaagttgcggcccttgttctttgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ctgtcatcacttcagcaaattgatcctgttcctggtcaagttgcggcccttgttctttgc 529
Query: 361 cacacgagggaactagcttatcagatttgccatgaatttgagaggttcagcacatatctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 cacacgagggaactagcttatcagatttgccatgaatttgagaggttcagcacatatctt 589
Query: 421 cctgatataaaagttgctgttttctatggaggtgtcaa 458
||||||||||||||||||||||||||||||||||||||
Sbjct: 590 cctgatataaaagttgctgttttctatggaggtgtcaa 627
>gnl|LJGI|FS325491 homologue to UniRef100_A7QIQ3 Cluster: Chromosome chr9
scaffold_104, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_104, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (47%)
Length = 841
Score = 819 bits (413), Expect = 0.0
Identities = 413/413 (100%)
Strand = Plus / Plus
Query: 210 agtgcaacatgaatgcatccctcaagcaattttaggaatggatgttatctgccaagcaaa 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 agtgcaacatgaatgcatccctcaagcaattttaggaatggatgttatctgccaagcaaa 488
Query: 270 atctgggatgggaaagactgctgtgtttgttctgtcatcacttcagcaaattgatcctgt 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 atctgggatgggaaagactgctgtgtttgttctgtcatcacttcagcaaattgatcctgt 548
Query: 330 tcctggtcaagttgcggcccttgttctttgccacacgagggaactagcttatcagatttg 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tcctggtcaagttgcggcccttgttctttgccacacgagggaactagcttatcagatttg 608
Query: 390 ccatgaatttgagaggttcagcacatatcttcctgatataaaagttgctgttttctatgg 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ccatgaatttgagaggttcagcacatatcttcctgatataaaagttgctgttttctatgg 668
Query: 450 aggtgtcaatatcaaggttcacaaagaattgctcaagaatgaatgtccccatattgttgt 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 aggtgtcaatatcaaggttcacaaagaattgctcaagaatgaatgtccccatattgttgt 728
Query: 510 tggaacacctgggaggattcttgctctgactagagacaaggaccttggtttgaagaatgt 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tggaacacctgggaggattcttgctctgactagagacaaggaccttggtttgaagaatgt 788
Query: 570 gaggcattttatacttgatgagtgcgacaagatgcttgaatcacttgatatga 622
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 gaggcattttatacttgatgagtgcgacaagatgcttgaatcacttgatatga 841
Score = 418 bits (211), Expect = e-116
Identities = 211/211 (100%)
Strand = Plus / Plus
Query: 1 atgggtgaattgaaagacactgaggcttacgaggaagaactcatcgattatgaggaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 atgggtgaattgaaagacactgaggcttacgaggaagaactcatcgattatgaggaagaa 148
Query: 61 gatgaaaaagcccctgattctgccaagcccgcggctgaaacagccaaaaagggttatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gatgaaaaagcccctgattctgccaagcccgcggctgaaacagccaaaaagggttatgtt 208
Query: 121 ggtatacatagttcgggatttcgcgacttcctgttgaaaccagagcttcttcgagctatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ggtatacatagttcgggatttcgcgacttcctgttgaaaccagagcttcttcgagctatt 268
Query: 181 gtagattctggatttgagcatccttcagaag 211
|||||||||||||||||||||||||||||||
Sbjct: 269 gtagattctggatttgagcatccttcagaag 299
>gnl|LJGI|TC78076 homologue to UniRef100_A9SV98 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(40%)
Length = 822
Score = 244 bits (123), Expect = 1e-63
Identities = 336/407 (82%)
Strand = Plus / Plus
Query: 766 aagttgaccctccatggtcttgttcagcactatatcaaattgcaagattcagagaagaat 825
||||| ||||| ||||| ||||| |||||||| |||||| || |||| ||||| ||
Sbjct: 5 aagttaacccttcatggacttgtgcagcactacatcaaactgaaagaggaggagaaaaac 64
Query: 826 cgtaagttgaatgatcttcttgatgctcttgacttcaaccaagttgttatttttgtcaag 885
|| ||||||||||||||||||||||| || ||||| |||||||| ||||| ||||| ||
Sbjct: 65 cggaagttgaatgatcttcttgatgcactagactttaaccaagtagttatctttgtgaaa 124
Query: 886 agtgtaagcagagcagcagaattgaacaagttgcttgtggagtgtaatttcccgtcaatc 945
||||| || |||||||| || || |||| | ||||||||||| || || || || ||
Sbjct: 125 agtgtgagtagagcagctgagctggacaaactacttgtggagtgcaactttccatctata 184
Query: 946 tgcatacattctggaatgtcacaggaagaaaggttgaaacgatacaaaggtttcaaagag 1005
||||| |||||||| ||||| |||||||||||||| || || || ||||||||||| |||
Sbjct: 185 tgcattcattctggcatgtcccaggaagaaaggttaaagcgttataaaggtttcaaggag 244
Query: 1006 gggaagcaaaggattcttgtggcaacagatttagtaggaagggggattgatatagaacgt 1065
||| | ||||||||| |||||||||||||| || || ||||||||||| || || ||
Sbjct: 245 gggcatacaaggattctggtggcaacagatttggttggtagggggattgacattgagcga 304
Query: 1066 gttaatatagtcataaactatgacatgcctgattctgctgatacttatctacacagggtt 1125
|| ||||| || ||||| ||||||||||||||||||||||| || ||| |||||||||||
Sbjct: 305 gtcaatatcgttataaattatgacatgcctgattctgctgacacatatttacacagggtt 364
Query: 1126 ggaagagctggcagatttgggaccaaggggcttgcaattacttttgt 1172
|| ||||||| |||||||| ||||| || |||||||| || |||||
Sbjct: 365 ggccgagctggaagatttggcaccaaaggccttgcaatcacatttgt 411
>gnl|LJGI|TC70039 similar to UniRef100_Q0JM17 Cluster: DEAD-box ATP-dependent RNA
helicase 56; n=1; Oryza sativa Japonica Group|Rep:
DEAD-box ATP-dependent RNA helicase 56 - Oryza sativa
subsp. japonica (Rice), partial (23%)
Length = 903
Score = 143 bits (72), Expect = 3e-33
Identities = 165/196 (84%)
Strand = Plus / Plus
Query: 977 ggttgaaacgatacaaaggtttcaaagaggggaagcaaaggattcttgtggcaacagatt 1036
||||||| || || || ||||| || |||||| || |||||||||||| ||||||||||
Sbjct: 304 ggttgaagcgttataagggttttaaggaggggcagacaaggattcttgtagcaacagatt 363
Query: 1037 tagtaggaagggggattgatatagaacgtgttaatatagtcataaactatgacatgcctg 1096
| || || ||||| ||||| || |||||||| |||||||||||||| |||||||||||||
Sbjct: 364 tggttggtaggggaattgacattgaacgtgtgaatatagtcataaattatgacatgcctg 423
Query: 1097 attctgctgatacttatctacacagggttggaagagctggcagatttgggaccaaggggc 1156
||||||| || || ||| | ||||||||||| ||||||| || ||||| ||||| || |
Sbjct: 424 attctgcagacacatatttgcacagggttggccgagctggaaggtttggcaccaaaggtc 483
Query: 1157 ttgcaattacttttgt 1172
|||||||||| |||||
Sbjct: 484 ttgcaattacatttgt 499
>gnl|LJGI|TC63543 similar to UniRef100_Q0JM17 Cluster: DEAD-box ATP-dependent RNA
helicase 56; n=1; Oryza sativa Japonica Group|Rep:
DEAD-box ATP-dependent RNA helicase 56 - Oryza sativa
subsp. japonica (Rice), partial (23%)
Length = 884
Score = 141 bits (71), Expect = 1e-32
Identities = 137/159 (86%)
Strand = Plus / Plus
Query: 1014 aaggattcttgtggcaacagatttagtaggaagggggattgatatagaacgtgttaatat 1073
|||||||||||| ||||||||||| || || ||||| ||||| || |||||||| |||||
Sbjct: 288 aaggattcttgtagcaacagatttggttggtaggggaattgacattgaacgtgtgaatat 347
Query: 1074 agtcataaactatgacatgcctgattctgctgatacttatctacacagggttggaagagc 1133
||||||||| |||||||||||||||||||| || || ||| | ||||||||||| ||||
Sbjct: 348 agtcataaattatgacatgcctgattctgcagacacatatttgcacagggttggccgagc 407
Query: 1134 tggcagatttgggaccaaggggcttgcaattacttttgt 1172
||| || ||||| ||||| || ||||||||||| |||||
Sbjct: 408 tggaaggtttggcaccaaaggtcttgcaattacatttgt 446