Miyakogusa Predicted Gene
- Lj0g3v0208709.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0208709.2 tr|G7J352|G7J352_MEDTR Serine/threonine protein
kinase AFC2 OS=Medicago truncatula GN=MTR_3g086530
P,85.05,0,PROTEIN_KINASE_DOM,Protein kinase, catalytic domain;
Serine/Threonine protein kinases, catalytic,Ser,CUFF.13473.2
(1299 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV422334 similar to UniRef100_A7PCQ0 Cluster: Chromosom... 977 0.0
gnl|LJGI|AV764773 similar to UniRef100_Q0JHX2 Cluster: Os01g0837... 323 2e-87
gnl|LJGI|BW597877 similar to UniRef100_A7PCQ0 Cluster: Chromosom... 278 8e-74
gnl|LJGI|TC80822 homologue to UniRef100_A7PCQ0 Cluster: Chromoso... 222 4e-57
gnl|LJGI|TC79690 similar to UniRef100_Q9M598 Cluster: Protein ki... 135 8e-31
gnl|LJGI|FS326902 similar to UniRef100_Q0JHX2 Cluster: Os01g0837... 72 1e-11
gnl|LJGI|TC78221 similar to UniRef100_A7P5G1 Cluster: Chromosome... 60 4e-08
>gnl|LJGI|AV422334 similar to UniRef100_A7PCQ0 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 493
Score = 977 bits (493), Expect = 0.0
Identities = 493/493 (100%)
Strand = Plus / Plus
Query: 589 gatcttgtccgtgagcttggcaggcaactgttggaatgtgtagcattcatgcatgatttg 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatcttgtccgtgagcttggcaggcaactgttggaatgtgtagcattcatgcatgatttg 60
Query: 649 cgcctcatccacacagacttgaagcctgaaaatatactttttatttcctcagaatatgta 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgcctcatccacacagacttgaagcctgaaaatatactttttatttcctcagaatatgta 120
Query: 709 gttcctgactacaaggttacattccggtcaccaaaagatcccatctcttttaagagactg 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttcctgactacaaggttacattccggtcaccaaaagatcccatctcttttaagagactg 180
Query: 769 ccaaagtcaagtgctattaaggttatcgactttggtagtacggcctatgagcaccaaggt 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaaagtcaagtgctattaaggttatcgactttggtagtacggcctatgagcaccaaggt 240
Query: 829 cacaactatattgtctctactaggcattatcgggcacctgaggttattctcggacttggg 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacaactatattgtctctactaggcattatcgggcacctgaggttattctcggacttggg 300
Query: 889 tggagttctccttgtgacatatggagtgttggatgcattttgatggagttgtgctcggga 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggagttctccttgtgacatatggagtgttggatgcattttgatggagttgtgctcggga 360
Query: 949 gaagctttgtttcagacgcatgagaatttggagcacctagccatgatggagagggtttta 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaagctttgtttcagacgcatgagaatttggagcacctagccatgatggagagggtttta 420
Query: 1009 ggccctttaccacagcacatgttgaaaagagcagaccggcttggagagaagtatgtcaga 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggccctttaccacagcacatgttgaaaagagcagaccggcttggagagaagtatgtcaga 480
Query: 1069 aggggtagactga 1081
|||||||||||||
Sbjct: 481 aggggtagactga 493
>gnl|LJGI|AV764773 similar to UniRef100_Q0JHX2 Cluster: Os01g0837900 protein; n=2; Oryza
sativa Japonica Group|Rep: Os01g0837900 protein - Oryza
sativa subsp. japonica (Rice), partial (11%)
Length = 413
Score = 323 bits (163), Expect = 2e-87
Identities = 166/167 (99%)
Strand = Plus / Minus
Query: 1133 tgcctcgtcttcctaatctggtgatgcagcatgtggatcactctgctggggatcttcttg 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tgcctcgtcttcctaatctggtgatgcagcatgtggatcactctgctggggatcttcttg 354
Query: 1193 atctcttgcagggccttcttcgatttgatcccttctgcaggctaaaggcccacgaagcgc 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 atctcttgcagggccttcttcgatttgatcccttctgcaggctaaaggcccacgaagcgc 294
Query: 1253 tcaggcatcccttttttaccagggagcattaccagagattttaatat 1299
||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 293 tcaggcatccctttttttccagggagcattaccagagattttaatat 247
>gnl|LJGI|BW597877 similar to UniRef100_A7PCQ0 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 482
Score = 278 bits (140), Expect = 8e-74
Identities = 140/140 (100%)
Strand = Plus / Plus
Query: 495 tgactaccgtaaccatatttgcattgtatttgagatgcttggaccaagcttatatgattt 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tgactaccgtaaccatatttgcattgtatttgagatgcttggaccaagcttatatgattt 70
Query: 555 tcttcggaagaacaattatcgcccatttccggttgatcttgtccgtgagcttggcaggca 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tcttcggaagaacaattatcgcccatttccggttgatcttgtccgtgagcttggcaggca 130
Query: 615 actgttggaatgtgtagcat 634
||||||||||||||||||||
Sbjct: 131 actgttggaatgtgtagcat 150
>gnl|LJGI|TC80822 homologue to UniRef100_A7PCQ0 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (61%)
Length = 644
Score = 222 bits (112), Expect = 4e-57
Identities = 196/224 (87%)
Strand = Plus / Plus
Query: 463 ggcagccgctgtgttcaaatacgcaactggtttgactaccgtaaccatatttgcattgta 522
|||||||| |||||||||||||| |||||||||||||| ||||| ||||| || |||||
Sbjct: 43 ggcagccgttgtgttcaaatacggaactggtttgactatcgtaatcatatctgtattgtg 102
Query: 523 tttgagatgcttggaccaagcttatatgattttcttcggaagaacaattatcgcccattt 582
||||||| ||||||||||||||||| |||||||||||||| |||||||||||| |||||
Sbjct: 103 tttgagaaacttggaccaagcttatacgattttcttcggaaaaacaattatcgctcattt 162
Query: 583 ccggttgatcttgtccgtgagcttggcaggcaactgttggaatgtgtagcattcatgcat 642
|| ||||||||||||||||| ||||||| ||||| ||||||||| | ||||||||||||
Sbjct: 163 cccattgatcttgtccgtgagattggcagacaactattggaatgtattgcattcatgcat 222
Query: 643 gatttgcgcctcatccacacagacttgaagcctgaaaatatact 686
|| ||| || | ||||| || ||| |||||||||| || |||||
Sbjct: 223 gacttgtgcatgatccatactgacctgaagcctgagaacatact 266
>gnl|LJGI|TC79690 similar to UniRef100_Q9M598 Cluster: Protein kinase MK5; n=1;
Mesembryanthemum crystallinum|Rep: Protein kinase MK5 -
Mesembryanthemum crystallinum (Common ice plant), partial
(71%)
Length = 1518
Score = 135 bits (68), Expect = 8e-31
Identities = 266/332 (80%)
Strand = Plus / Plus
Query: 760 aagagactgccaaagtcaagtgctattaaggttatcgactttggtagtacggcctatgag 819
|||||| |||| |||||||||||||| |||||||| |||||||| ||||| | ||| ||
Sbjct: 690 aagagagtgcccaagtcaagtgctataaaggttattgactttggcagtaccacttataag 749
Query: 820 caccaaggtcacaactatattgtctctactaggcattatcgggcacctgaggttattctc 879
| ||| ||| | || ||||| || ||| | |||||| | |||||||| || || ||
Sbjct: 750 cgagaagatcaaagttacattgtatcaactcgtcattatagagcacctgaagtcatcctt 809
Query: 880 ggacttgggtggagttctccttgtgacatatggagtgttggatgcattttgatggagttg 939
|||||||| ||||||| ||| ||||| | |||||| || ||||| || || | || |
Sbjct: 810 ggacttggctggagttatccatgtgatacatggagcgtgggatgtatactggttgaacta 869
Query: 940 tgctcgggagaagctttgtttcagacgcatgagaatttggagcacctagccatgatggag 999
||| |||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 870 tgcacgggcgaagctttgtttcagactcatgagaatttagagcaccttgccatgatggag 929
Query: 1000 agggttttaggccctttaccacagcacatgttgaaaagagcagaccggcttggagagaag 1059
||||| | || || ||||| |||||||||||||| |||| ||||| | | |||||
Sbjct: 930 agggtacttggtccattaccgcagcacatgttgaagagagtcgaccgacattctgagaaa 989
Query: 1060 tatgtcagaaggggtagactgaactggcctga 1091
||||| |||||||||||| | ||||||||||
Sbjct: 990 tatgttagaaggggtagattagactggcctga 1021
Score = 65.9 bits (33), Expect = 6e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 217 tctccccaatggcgagatgatgacaaagatggacattacatgttt 261
||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 306 tctcccccttggcgagatgatgacaaagatgggcattacatgttt 350
>gnl|LJGI|FS326902 similar to UniRef100_Q0JHX2 Cluster: Os01g0837900 protein; n=2;
Oryza sativa Japonica Group|Rep: Os01g0837900 protein -
Oryza sativa subsp. japonica (Rice), partial (38%)
Length = 767
Score = 71.9 bits (36), Expect = 1e-11
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 490 tggtttgactaccgtaaccatatttgcattgtatttgagatgcttggaccaagcttatat 549
|||||||| ||||| || || || |||||||| ||||||| ||||||||||||||||| |
Sbjct: 593 tggtttgattaccgaaatcacatatgcattgtctttgagaagcttggaccaagcttattt 652
Query: 550 gattttct 557
||||||||
Sbjct: 653 gattttct 660
>gnl|LJGI|TC78221 similar to UniRef100_A7P5G1 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 800
Score = 60.0 bits (30), Expect = 4e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 655 atccacacagacttgaagcctgaaaatatactttttatttcctcagaatatgta 708
|||||||||||| ||||||| |||||||||||| || |||| || |||||||||
Sbjct: 32 atccacacagacctgaagccagaaaatatacttcttgtttcttctgaatatgta 85