Miyakogusa Predicted Gene

Lj0g3v0208329.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0208329.1 Non Chatacterized Hit- tr|B9SRA4|B9SRA4_RICCO
Putative uncharacterized protein OS=Ricinus communis G,49.09,3e-17,
,CUFF.13354.1
         (438 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59969                                                      868   0.0  
gnl|LJGI|TC79681                                                       56   2e-07

>gnl|LJGI|TC59969 
          Length = 798

 Score =  868 bits (438), Expect = 0.0
 Identities = 438/438 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtcacatgagctatagcagagttagcagtgcaaagttttcagcttgcagcagccag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 atgggtcacatgagctatagcagagttagcagtgcaaagttttcagcttgcagcagccag 229

                                                                       
Query: 61  ggtagctccagaggatttagattaaacccaagaaaggtttatgttttcaggctacgcaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ggtagctccagaggatttagattaaacccaagaaaggtttatgttttcaggctacgcaag 289

                                                                       
Query: 121 aggttcaattgctttctcaggctctttgataatttgaaactgtcatattttgatgctctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aggttcaattgctttctcaggctctttgataatttgaaactgtcatattttgatgctctt 349

                                                                       
Query: 181 caactgctgaagaaagtggtttggagaagaggtagcttcagaagaaacaacagcagcaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 caactgctgaagaaagtggtttggagaagaggtagcttcagaagaaacaacagcagcaag 409

                                                                       
Query: 241 agaagtttggtgaggaaggaacaaataatcaagggccaagctgattgtaggatgagatca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 agaagtttggtgaggaaggaacaaataatcaagggccaagctgattgtaggatgagatca 469

                                                                       
Query: 301 tcatattatggcaggtccaattctttctatgcagaggctattgctgattgcttggagttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tcatattatggcaggtccaattctttctatgcagaggctattgctgattgcttggagttt 529

                                                                       
Query: 361 atcaaaacaacatcatctattccatctaaggatcaaatacaagacccaatcaaccatttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 atcaaaacaacatcatctattccatctaaggatcaaatacaagacccaatcaaccatttt 589

                             
Query: 421 caagatagaaacacatga 438
           ||||||||||||||||||
Sbjct: 590 caagatagaaacacatga 607


>gnl|LJGI|TC79681 
          Length = 756

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 323 ctttctatgcagaggctattgctgattgcttggagtttatcaaaacaacatc 374
           ||||| ||||||| || ||||| |||||||||||||| ||||||| ||||||
Sbjct: 350 ctttcaatgcagaagccattgcagattgcttggagttcatcaaaagaacatc 401