Miyakogusa Predicted Gene
- Lj0g3v0208169.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0208169.1 Non Chatacterized Hit- tr|I1IQZ4|I1IQZ4_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,32.39,2e-18,no
description,Methyl-CpG DNA binding; seg,NULL; DNA-binding
domain,DNA-binding, integrase-type; MBD,CUFF.13366.1
(2154 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS328896 1489 0.0
gnl|LJGI|DC594575 682 0.0
gnl|LJGI|TC76445 252 8e-66
>gnl|LJGI|FS328896
Length = 762
Score = 1489 bits (751), Expect = 0.0
Identities = 761/763 (99%), Gaps = 1/763 (0%)
Strand = Plus / Plus
Query: 1297 gagaattcggttggtgctattcaggctagtgatgctgcagttaatttatatattcctctg 1356
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 1 gagaattcggttggtgctattccggctagtgatgct-cagttaatttatatattcctctg 59
Query: 1357 gttttcacatctcctttatctaataatgatattggtattgaccaactttctgatgaaaga 1416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gttttcacatctcctttatctaataatgatattggtattgaccaactttctgatgaaaga 119
Query: 1417 aatgctgtaacacgcacaaatagtggcatttataattttgatggtcaggatagaaataca 1476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 aatgctgtaacacgcacaaatagtggcatttataattttgatggtcaggatagaaataca 179
Query: 1477 gtatcctatgaaactgttccatgtggaaaggatcaagcacattttgacaactgttccaca 1536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gtatcctatgaaactgttccatgtggaaaggatcaagcacattttgacaactgttccaca 239
Query: 1537 gtcatgacacagacgtccatgctgaaggactctgctgtgggaagtttgtttgataattat 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gtcatgacacagacgtccatgctgaaggactctgctgtgggaagtttgtttgataattat 299
Query: 1597 tttcctagtggtggtgtcccagatgcatccgggtctggtggagttgattttattcctggc 1656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tttcctagtggtggtgtcccagatgcatccgggtctggtggagttgattttattcctggc 359
Query: 1657 cttaaagtaggtaaggatgttaatgataatcatgtttatccaaatgaggaagttgtgaca 1716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cttaaagtaggtaaggatgttaatgataatcatgtttatccaaatgaggaagttgtgaca 419
Query: 1717 agctatttacagaaaaggagttcctcagatgatcaaatgttcacaatggacaatttgttg 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 agctatttacagaaaaggagttcctcagatgatcaaatgttcacaatggacaatttgttg 479
Query: 1777 ggtggaagttttgaaggtaacttatttcctctggccaataatcatcacccttctgctttt 1836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ggtggaagttttgaaggtaacttatttcctctggccaataatcatcacccttctgctttt 539
Query: 1837 caagataatatgaatatcactgctggaacttttgacgtgctcaaatctgtggatgctggt 1896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 caagataatatgaatatcactgctggaacttttgacgtgctcaaatctgtggatgctggt 599
Query: 1897 tgtgtggagcctcagttaggcattatttcttctagcaatgttgttgcagcagacgcatgt 1956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tgtgtggagcctcagttaggcattatttcttctagcaatgttgttgcagcagacgcatgt 659
Query: 1957 acatctgcaagagttatgcagggaacttctgaaggacgtgtatctgttcctcttggtgga 2016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 acatctgcaagagttatgcagggaacttctgaaggacgtgtatctgttcctcttggtgga 719
Query: 2017 agtatgtcaaactgttttgacaagcaatgcgatgatgatgtta 2059
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 agtatgtcaaactgttttgacaagcaatgcgatgatgatgtta 762
>gnl|LJGI|DC594575
Length = 471
Score = 682 bits (344), Expect = 0.0
Identities = 395/420 (94%)
Strand = Plus / Plus
Query: 1 atggaaacggcggaatcctctgtcaatcatcccatcttgtctcttccgcttatcgacctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 atggaaacggcggaatcctctgtcaatcatcccatcttgtctcttccgcttatcgacctc 111
Query: 61 cgcctgttatcccaaccagaattgcactccctctccttctcctccgccaccaacggcggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 cgcctgttatcccaaccagaattgcactccctctccttctcctccgccaccaacggcggc 171
Query: 121 accaaccaccacttcgacatccccaaaattcaaattgaccgttcaattttcaatgagtcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 accaaccaccacttcgacatccccaaaattcaaattgaccgttcaattttcaatgagtcc 231
Query: 181 gccggcagccgcaagcagacctactcccgtctccgccttcttccgcggaacaaatccaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 gccggcagccgcaagcagacctactcccgtctccgccttcttccgcggaacaaatccaat 291
Query: 241 tcccgtcgttcccnnnnnnnnnnnnnnnnnnnnnnnntccgcattccgccggagccagaa 300
||||||||||||| |||||||||||||||||||||||
Sbjct: 292 tcccgtcgttccccctcctcctcctccacctcctccttccgcattccgccggagccagaa 351
Query: 301 aactccgacgtagtttccttcctcaaagggcttttcggcgtcgtaccactccgcggtgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aactccgacgtagtttccttcctcaaagggcttttcggcgtcgtaccactccgcggtgcc 411
Query: 361 aacaacgtcaacccccatgatcctcttcgggtattggccctgccgccaccacccgtggcg 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 412 aacaacgtcaacccccatgatcctcttcaggtattggccctgccgccaccacccgtggcg 471
>gnl|LJGI|TC76445
Length = 679
Score = 252 bits (127), Expect = 8e-66
Identities = 127/127 (100%)
Strand = Plus / Plus
Query: 2028 ctgttttgacaagcaatgcgatgatgatgttaataaagaaaagaaatcttgcttatctga 2087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgttttgacaagcaatgcgatgatgatgttaataaagaaaagaaatcttgcttatctga 60
Query: 2088 gaaggctaagagtgaagttgaaatgttccaaaacgactctatgggtatgtccaaattcca 2147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaggctaagagtgaagttgaaatgttccaaaacgactctatgggtatgtccaaattcca 120
Query: 2148 gtagcag 2154
|||||||
Sbjct: 121 gtagcag 127