Miyakogusa Predicted Gene

Lj0g3v0207759.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0207759.1 Non Chatacterized Hit- tr|K4CAS5|K4CAS5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,39.55,2e-17,seg,NULL,CUFF.13315.1
         (569 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77648                                                       70   2e-11

>gnl|LJGI|TC77648 
          Length = 2212

 Score = 69.9 bits (35), Expect = 2e-11
 Identities = 116/143 (81%)
 Strand = Plus / Plus

                                                                       
Query: 287 ggagctttttgctctctgagttatgggctggacctacctactcaaattcaccccctccaa 346
           ||||||||||||| |||||  | |||||||||||||| |||||||||||||| || || |
Sbjct: 727 ggagctttttgctatctgaactttgggctggacctacttactcaaattcaccgccaccga 786

                                                                       
Query: 347 gttcattgccaattcccaagttttctgtccagccaaagaggactgtgtctctgaatcttc 406
           |||| ||||| || || || || |||||  | || ||||||||||| || ||  |||| |
Sbjct: 787 gttccttgcctatcccgaaattctctgttaaaccgaagaggactgtttcccttgatctgc 846

                                  
Query: 407 ctggttcctcccctgaggttgaa 429
           || |||||| |||| || |||||
Sbjct: 847 ctagttcctgccctaagattgaa 869