Miyakogusa Predicted Gene

Lj0g3v0207679.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0207679.1 tr|I0Z1L2|I0Z1L2_9CHLO DNA glycosylase
OS=Coccomyxa subellipsoidea C-169 PE=4
SV=1,48.45,3e-19,DNA-glycosylase,DNA glycosylase; HhH-GPD,HhH-GPD
domain; no description,DNA glycosylase; 5-METHYLCYT,CUFF.13312.1
         (333 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58046 similar to UniRef100_A7R238 Cluster: Chromosome...   624   e-179

>gnl|LJGI|TC58046 similar to UniRef100_A7R238 Cluster: Chromosome undetermined
            scaffold_397, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_397, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (33%)
          Length = 1465

 Score =  624 bits (315), Expect = e-179
 Identities = 315/315 (100%)
 Strand = Plus / Plus

                                                                        
Query: 19   caggtaagagcagttatatcagactttttcaggttatgccctgatgcacaaacctgcact 78
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832  caggtaagagcagttatatcagactttttcaggttatgccctgatgcacaaacctgcact 891

                                                                        
Query: 79   caagtatcaaaagatgaaatcgtggaggtaatacggaaactaggcttacataagagggca 138
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  caagtatcaaaagatgaaatcgtggaggtaatacggaaactaggcttacataagagggca 951

                                                                        
Query: 139  gctatgctacaacgcttttctcgagaatatttggaggaaaattggactcatgtaactcag 198
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952  gctatgctacaacgcttttctcgagaatatttggaggaaaattggactcatgtaactcag 1011

                                                                        
Query: 199  ttacatggtgttggcaagtatgctgctgatgcatatgccatattttgtacgggaaaatgg 258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 ttacatggtgttggcaagtatgctgctgatgcatatgccatattttgtacgggaaaatgg 1071

                                                                        
Query: 259  gatcgagtgacaccctcagatcacaagctagttaagtattgggaatttcttcgtcttatc 318
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 gatcgagtgacaccctcagatcacaagctagttaagtattgggaatttcttcgtcttatc 1131

                           
Query: 319  tatcaagattaattt 333
            |||||||||||||||
Sbjct: 1132 tatcaagattaattt 1146