Miyakogusa Predicted Gene
- Lj0g3v0207199.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0207199.1 Non Chatacterized Hit- tr|I1H7V2|I1H7V2_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,55.56,2e-19,Lzipper-MIP1,Ternary complex factor MIP1,
leucine-zipper; UNCHARACTERIZED,NULL,CUFF.13272.1
(462 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66501 similar to UniRef100_A7R4B2 Cluster: Chromosome... 910 0.0
gnl|LJGI|DC593288 similar to UniRef100_A7R4B2 Cluster: Chromosom... 662 0.0
gnl|LJGI|FS340961 similar to UniRef100_A7R4B2 Cluster: Chromosom... 92 4e-18
gnl|LJGI|DC599513 homologue to UniRef100_A7QCM6 Cluster: Chromos... 54 8e-07
>gnl|LJGI|TC66501 similar to UniRef100_A7R4B2 Cluster: Chromosome undetermined
scaffold_644, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_644,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (15%)
Length = 1178
Score = 910 bits (459), Expect = 0.0
Identities = 459/459 (100%)
Strand = Plus / Plus
Query: 1 atgttcctggaaatggggcttgaaggtctcattccaatgcacaagcgttcaaagagcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 atgttcctggaaatggggcttgaaggtctcattccaatgcacaagcgttcaaagagcttt 476
Query: 61 cccaataaaagaacagtcgaggaggataattctgatgacgttgaagccttagatcgaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 cccaataaaagaacagtcgaggaggataattctgatgacgttgaagccttagatcgaata 536
Query: 121 aagctggatacaggttacctcacggaatgcggtgaagcaaggaaaaaaccgacccgtaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 aagctggatacaggttacctcacggaatgcggtgaagcaaggaaaaaaccgacccgtaca 596
Query: 181 aatgatgttcaatgtgctctcaagcaagagattctacagttagaaaaaagactacaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 aatgatgttcaatgtgctctcaagcaagagattctacagttagaaaaaagactacaagat 656
Query: 241 caatttgaggtcagatgcacattagaaaaggcacttggatacagacctacatttcttgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 caatttgaggtcagatgcacattagaaaaggcacttggatacagacctacatttcttgtt 716
Query: 301 aatccaaatgagatggccatccccaagcctaccgcagaattaattaaagaaattgcggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 aatccaaatgagatggccatccccaagcctaccgcagaattaattaaagaaattgcggtg 776
Query: 361 cttgagttagaagttgtgtatttggaacaacatctcctctccttgtaccgtaaagcattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 cttgagttagaagttgtgtatttggaacaacatctcctctccttgtaccgtaaagcattt 836
Query: 421 gatcaacaattatcctttgtcgctccatccaccaacgag 459
|||||||||||||||||||||||||||||||||||||||
Sbjct: 837 gatcaacaattatcctttgtcgctccatccaccaacgag 875
>gnl|LJGI|DC593288 similar to UniRef100_A7R4B2 Cluster: Chromosome undetermined
scaffold_644, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_644,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (11%)
Length = 584
Score = 662 bits (334), Expect = 0.0
Identities = 334/334 (100%)
Strand = Plus / Plus
Query: 126 ggatacaggttacctcacggaatgcggtgaagcaaggaaaaaaccgacccgtacaaatga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 ggatacaggttacctcacggaatgcggtgaagcaaggaaaaaaccgacccgtacaaatga 124
Query: 186 tgttcaatgtgctctcaagcaagagattctacagttagaaaaaagactacaagatcaatt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tgttcaatgtgctctcaagcaagagattctacagttagaaaaaagactacaagatcaatt 184
Query: 246 tgaggtcagatgcacattagaaaaggcacttggatacagacctacatttcttgttaatcc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tgaggtcagatgcacattagaaaaggcacttggatacagacctacatttcttgttaatcc 244
Query: 306 aaatgagatggccatccccaagcctaccgcagaattaattaaagaaattgcggtgcttga 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aaatgagatggccatccccaagcctaccgcagaattaattaaagaaattgcggtgcttga 304
Query: 366 gttagaagttgtgtatttggaacaacatctcctctccttgtaccgtaaagcatttgatca 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gttagaagttgtgtatttggaacaacatctcctctccttgtaccgtaaagcatttgatca 364
Query: 426 acaattatcctttgtcgctccatccaccaacgag 459
||||||||||||||||||||||||||||||||||
Sbjct: 365 acaattatcctttgtcgctccatccaccaacgag 398
>gnl|LJGI|FS340961 similar to UniRef100_A7R4B2 Cluster: Chromosome undetermined
scaffold_644, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_644,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (5%)
Length = 636
Score = 91.7 bits (46), Expect = 4e-18
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 197 ctctcaagcaagagattctacagttagaaaaaagactacaagatcaatttgaggtcagat 256
|||| |||||||||| ||| ||| |||| | |||| ||||||||||||||||||| ||||
Sbjct: 551 ctctgaagcaagagactctccagctagagagaagattacaagatcaatttgaggttagat 610
Query: 257 gcacattagaaaaggcacttggatac 282
|||| || ||||||||||||||||||
Sbjct: 611 gcacgttggaaaaggcacttggatac 636
>gnl|LJGI|DC599513 homologue to UniRef100_A7QCM6 Cluster: Chromosome chr12
scaffold_78, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_78, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 564
Score = 54.0 bits (27), Expect = 8e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 26 gtctcattccaatgcacaagcgttcaaagag 56
|||| ||||||||||||||||||||||||||
Sbjct: 138 gtctgattccaatgcacaagcgttcaaagag 168