Miyakogusa Predicted Gene

Lj0g3v0206779.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0206779.1 Non Chatacterized Hit- tr|C4J6G1|C4J6G1_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,34.93,1e-18,UNCHARACTERIZED,NULL; SERINE INCORPORATOR,TMS
membrane protein/tumour differentially expressed prote,CUFF.13239.1
         (936 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW599766 similar to UniRef100_A7NXR3 Cluster: Chromosom...   523   e-148

>gnl|LJGI|BW599766 similar to UniRef100_A7NXR3 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (7%)
          Length = 483

 Score =  523 bits (264), Expect = e-148
 Identities = 264/264 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagtgcatctgaggtaacaagtgaagcagcagcagtagtacatattcaggtaagtgac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 atgagtgcatctgaggtaacaagtgaagcagcagcagtagtacatattcaggtaagtgac 279

                                                                       
Query: 61  aggccgagcactgaggaagtaacagcttcattggatgattatgcagcagaaagaaagaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aggccgagcactgaggaagtaacagcttcattggatgattatgcagcagaaagaaagaaa 339

                                                                       
Query: 121 tcgctgcaagctcgctattattttggcatcatattcttgataatgaaccttgttgcctgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tcgctgcaagctcgctattattttggcatcatattcttgataatgaaccttgttgcctgg 399

                                                                       
Query: 181 tttttccgcgactatgggcaaagccttcttctaccttgggttcattatatcaaagtttgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tttttccgcgactatgggcaaagccttcttctaccttgggttcattatatcaaagtttgt 459

                                   
Query: 241 ggaaatgaaggagaagattgtttt 264
           ||||||||||||||||||||||||
Sbjct: 460 ggaaatgaaggagaagattgtttt 483