Miyakogusa Predicted Gene
- Lj0g3v0206369.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0206369.2 Non Chatacterized Hit- tr|I1L482|I1L482_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25536 PE,83.02,0,matE:
MATE efflux family protein,Multi antimicrobial extrusion protein;
seg,NULL; MATE EFFLUX FAMILY,CUFF.13262.2
(1116 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO036543 similar to UniRef100_A7PH11 Cluster: Chromosom... 801 0.0
gnl|LJGI|TC68231 similar to UniRef100_A7PH11 Cluster: Chromosome... 559 e-158
gnl|LJGI|TC69358 similar to UniRef100_A7PH11 Cluster: Chromosome... 523 e-148
gnl|LJGI|GO013204 similar to UniRef100_A7PH11 Cluster: Chromosom... 226 2e-58
gnl|LJGI|BP069580 similar to UniRef100_A7PH11 Cluster: Chromosom... 220 1e-56
>gnl|LJGI|GO036543 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 782
Score = 801 bits (404), Expect = 0.0
Identities = 426/432 (98%), Gaps = 1/432 (0%)
Strand = Plus / Plus
Query: 685 attcgtgtctcaaatgaacttggagctggtcatccacgggctgcacgtttagcagtggcc 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 attcgtgtctcaaatgaacttggagctggtcatccacgggctgcacgtttagcagtggcc 61
Query: 745 gttgtcatagtgattgccattattgaaagcatcttagttggagctgtgctggtcctaata 804
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gttgtcatagtgattgccattattgaaagcatcttagttggagctgtgctggtcctaatc 121
Query: 805 cgtaatatttggggttatgcttatagtaatgaagaagaagtggtcaaatatgtagcaact 864
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 122 cgtaatatttggggttatgcttatagtaatgaagaagaagtggtcaaatatgttgcaact 181
Query: 865 atgttgccaattcttgcagcatccaactttctggatggaatccaatctgttctttcaggc 924
||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 182 atgatgccaattcttgcagcatccaactttctggacggaatccaatctgttctttcaggc 241
Query: 925 aatgctagaggatgcggttggcagaaaattggtgcatttgtgaatctgggggcgtactat 984
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 242 aatgctagaggatgcggttggcagaaaattggtgcatttgtgaatctggggtcgtactat 301
Query: 985 atagttggaattccagcagctatcgtgttagcttttgtattggatattggagggaagggg 1044
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 302 atagttggaattccagcagctatcgtgttagcttttgtattggatattggagggaa-ggg 360
Query: 1045 ctgtggctgggaatcatatgtgcactcattgttcaagtattttccctaatgattattact 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgtggctgggaatcatatgtgcactcattgttcaagtattttccctaatgattattact 420
Query: 1105 atatggactgat 1116
||||||||||||
Sbjct: 421 atatggactgat 432
>gnl|LJGI|TC68231 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 895
Score = 559 bits (282), Expect = e-158
Identities = 291/294 (98%)
Strand = Plus / Plus
Query: 823 gcttatagtaatgaagaagaagtggtcaaatatgtagcaactatgttgccaattcttgca 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcttatagtaatgaagaagaagtggtcaaatatgtagcaactatgttgccaattcttgca 60
Query: 883 gcatccaactttctggatggaatccaatctgttctttcaggcaatgctagaggatgcggt 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcatccaactttctggatggaatccaatctgttctttcaggcaatgctagaggatgcggt 120
Query: 943 tggcagaaaattggtgcatttgtgaatctgggggcgtactatatagttggaattccagca 1002
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 121 tggcagaaaattggtgcatttgtgaatctggggtcgtactatatagttggaattccagca 180
Query: 1003 gctatcgtgttagcttttgtattggatattggagggaaggggctgtggctgggaatcata 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctatcgtgttagcttttgtattggatattggagggaaggggctgtggctgggaatcata 240
Query: 1063 tgtgcactcattgttcaagtattttccctaatgattattactatatggactgat 1116
||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 241 tgtgcactcattgttcaagtattttccctaatgattattactatacgaactgat 294
>gnl|LJGI|TC69358 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 795
Score = 523 bits (264), Expect = e-148
Identities = 264/264 (100%)
Strand = Plus / Plus
Query: 1 atggcaagtgccttagataccttatgtggtcaatcatatggggcaaagcagtaccgcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 atggcaagtgccttagataccttatgtggtcaatcatatggggcaaagcagtaccgcttg 589
Query: 61 ttaggcattcacatgcagagggctatgttgattcttatggttgtcagcattccgcttgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ttaggcattcacatgcagagggctatgttgattcttatggttgtcagcattccgcttgcg 649
Query: 121 attatttgggcaaacacaggatccatcctcattttccttggccaagatcctgagatatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 attatttgggcaaacacaggatccatcctcattttccttggccaagatcctgagatatct 709
Query: 181 gcagcagctggggaatatgctaagataatggttccatgcctttttggttatggtcttctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 gcagcagctggggaatatgctaagataatggttccatgcctttttggttatggtcttctg 769
Query: 241 caatgcctcaatagattcttacaa 264
||||||||||||||||||||||||
Sbjct: 770 caatgcctcaatagattcttacaa 793
>gnl|LJGI|GO013204 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 528
Score = 226 bits (114), Expect = 2e-58
Identities = 288/346 (83%)
Strand = Plus / Plus
Query: 1 atggcaagtgccttagataccttatgtggtcaatcatatggggcaaagcagtaccgcttg 60
||||| |||||||| |||||||| ||||| || |||||||| ||||||||| || | ||
Sbjct: 168 atggccagtgccttggataccttttgtgggcagtcatatggagcaaagcagcacagaatg 227
Query: 61 ttaggcattcacatgcagagggctatgttgattcttatggttgtcagcattccgcttgcg 120
|||||||| |||||||| ||||| ||| | | |||| || |||||||||| || | ||
Sbjct: 228 ttaggcatacacatgcaaagggccatgctcactcttgtgattgtcagcatacccttagca 287
Query: 121 attatttgggcaaacacaggatccatcctcattttccttggccaagatcctgagatatct 180
|| ||||||||||||||| | ||||| || ||||| |||||||||||||||| ||||||
Sbjct: 288 atcatttgggcaaacacaaggtccattctggttttctttggccaagatcctgaaatatct 347
Query: 181 gcagcagctggggaatatgctaagataatggttccatgcctttttggttatggtcttctg 240
|||| ||| ||| |||||||| || ||||||||||| ||||||||| |||||||||||
Sbjct: 348 gcagaagcagggaaatatgctcagttaatggttccaagcctttttgcctatggtcttctt 407
Query: 241 caatgcctcaatagattcttacaaacccaaaatattgtatttccaatgatgctcagctca 300
||||| || || |||||||||||||| |||||||||||||| |||| ||| |||||||
Sbjct: 408 caatgtctaaacagattcttacaaacacaaaatattgtattgccaactatgttcagctct 467
Query: 301 ggagtcacgaccttgcttcacttttttatatgttggattttggtat 346
||||| || || ||||| || || || | ||||||||||||||||
Sbjct: 468 ggagttactactttgctacatcttgttgtgtgttggattttggtat 513
>gnl|LJGI|BP069580 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 483
Score = 220 bits (111), Expect = 1e-56
Identities = 168/187 (89%)
Strand = Plus / Minus
Query: 918 ttcaggcaatgctagaggatgcggttggcagaaaattggtgcatttgtgaatctgggggc 977
|||||| | ||| |||||||| |||| ||||||||||||||||||| | ||||||||| |
Sbjct: 265 ttcaggaactgcaagaggatgtggtttgcagaaaattggtgcatttattaatctggggtc 206
Query: 978 gtactatatagttggaattccagcagctatcgtgttagcttttgtattggatattggagg 1037
|||||| ||||||||||||| |||||| || ||||||||||||||| ||||||||||
Sbjct: 205 atactatttagttggaattccgttagctatggtcttagcttttgtattgcatattggagg 146
Query: 1038 gaaggggctgtggctgggaatcatatgtgcactcattgttcaagtattttccctaatgat 1097
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 145 gaaggggctgtggctggggatcatatgtgcactcattgttcaagtattttctctaatgat 86
Query: 1098 tattact 1104
||||||
Sbjct: 85 cattact 79