Miyakogusa Predicted Gene
- Lj0g3v0206129.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0206129.1 tr|Q0DT18|Q0DT18_ORYSJ Os03g0275300 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os03g02753,69.86,3e-18,Ankyrin repeat,Ankyrin repeat-containing
domain; RING/U-box,NULL; seg,NULL; ZF_RING_2,Zinc finger,
R,CUFF.13226.1
(720 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61665 similar to UniRef100_A7PNL5 Cluster: Chromosome... 1427 0.0
gnl|LJGI|TC75099 similar to UniRef100_A7NZ23 Cluster: Chromosome... 58 8e-08
gnl|LJGI|FS361425 similar to UniRef100_A7NZ23 Cluster: Chromosom... 56 3e-07
>gnl|LJGI|TC61665 similar to UniRef100_A7PNL5 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (85%)
Length = 1823
Score = 1427 bits (720), Expect = 0.0
Identities = 720/720 (100%)
Strand = Plus / Plus
Query: 1 atggctgctcgtggtggttccgttgactgtgtgcgaatgctgcttgcttggggagcagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 atggctgctcgtggtggttccgttgactgtgtgcgaatgctgcttgcttggggagcagag 821
Query: 61 aggcttcaattagattcctctgggagaataccattcacagttgctctgaagcgcaagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 aggcttcaattagattcctctgggagaataccattcacagttgctctgaagcgcaagaac 881
Query: 121 agggcatgtgctgccctgcttgacccctcatcagcggcaccacttgtttggccatctcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 agggcatgtgctgccctgcttgacccctcatcagcggcaccacttgtttggccatctcca 941
Query: 181 ttgaagtttatcagtgagctcaatcaggaggccaagaccttactggagaatgccttacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 ttgaagtttatcagtgagctcaatcaggaggccaagaccttactggagaatgccttacta 1001
Query: 241 gaagccaacagggagagggaaaaggtcctactaaagcatgctgacatacctacatctcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 gaagccaacagggagagggaaaaggtcctactaaagcatgctgacatacctacatctcca 1061
Query: 301 ctacattctgaaggaaaagatgatgatgatattgtctctgactctgaggagagcaatatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 ctacattctgaaggaaaagatgatgatgatattgtctctgactctgaggagagcaatatg 1121
Query: 361 gatttatgctgtatatgctttgaccaagtgtgcacaattgaggtcaaaccttgtggccat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 gatttatgctgtatatgctttgaccaagtgtgcacaattgaggtcaaaccttgtggccat 1181
Query: 421 caaatgtgtgctcattgcactctagcactatgttgtctcaagaagcctgatccttcaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1182 caaatgtgtgctcattgcactctagcactatgttgtctcaagaagcctgatccttcaact 1241
Query: 481 ggttgcacaccgggaccagtttgtccattttgccgaggtgccattcttcagttaatagtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 ggttgcacaccgggaccagtttgtccattttgccgaggtgccattcttcagttaatagtt 1301
Query: 541 cccacgatcaagaatagcagtgatacagaagttgaatccaacccaacaaaaccaaggaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 cccacgatcaagaatagcagtgatacagaagttgaatccaacccaacaaaaccaaggaga 1361
Query: 601 tcaagaaaatcaaatttcagtgagggtagcagcagcttcaagagcttgtcagccattgga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 tcaagaaaatcaaatttcagtgagggtagcagcagcttcaagagcttgtcagccattgga 1421
Query: 661 tcatttggaaggattactggtcgcaattcaggaaagatcgatgatgctgaaaagcaatga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1422 tcatttggaaggattactggtcgcaattcaggaaagatcgatgatgctgaaaagcaatga 1481
>gnl|LJGI|TC75099 similar to UniRef100_A7NZ23 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (59%)
Length = 1114
Score = 58.0 bits (29), Expect = 8e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 163 cttgtttggccatctccattgaagtttatcagtgagctcaatcaggaggccaa 215
||||| |||||||||||||||||||| || |||||||| |||| ||| |||||
Sbjct: 1057 cttgtctggccatctccattgaagttcattagtgagcttaatctggaagccaa 1109
>gnl|LJGI|FS361425 similar to UniRef100_A7NZ23 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 689
Score = 56.0 bits (28), Expect = 3e-07
Identities = 85/104 (81%)
Strand = Plus / Minus
Query: 365 tatgctgtatatgctttgaccaagtgtgcacaattgaggtcaaaccttgtggccatcaaa 424
||||||| || |||||||| |||||||| |||||||| ||| || |||||||| ||||
Sbjct: 670 tatgctgcatttgctttgagcaagtgtgtacaattgaagtccaagaatgtggccaccaaa 611
Query: 425 tgtgtgctcattgcactctagcactatgttgtctcaagaagcct 468
||||||| | ||||| ||||| || ||||| | ||| ||||||
Sbjct: 610 tgtgtgcaaaatgcacactagccctctgttgccacaacaagcct 567