Miyakogusa Predicted Gene

Lj0g3v0205999.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0205999.1 tr|B9GMR8|B9GMR8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_708815 PE=4 SV=1,32.32,5e-19,BRCT
domain,BRCT domain; BRCT,BRCT domain; no description,NULL; seg,NULL;
breast cancer carboxy-term,CUFF.13168.1
         (627 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70542 weakly similar to UniRef100_A7QD70 Cluster: Chr...   299   1e-80
gnl|LJGI|TC61634 similar to UniRef100_A7QD70 Cluster: Chromosome...   234   5e-61
gnl|LJGI|TC72817 similar to UniRef100_Q9FJL6 Cluster: Gb|AAD2558...    88   8e-17

>gnl|LJGI|TC70542 weakly similar to UniRef100_A7QD70 Cluster: Chromosome undetermined
           scaffold_80, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_80, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (13%)
          Length = 544

 Score =  299 bits (151), Expect = 1e-80
 Identities = 225/251 (89%), Gaps = 9/251 (3%)
 Strand = Plus / Plus

                                                                       
Query: 328 ccctcagtcacacatgtagtttctactaaggctagaactgagaagttccagtgggctgag 387
           ||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||
Sbjct: 1   ccctcagtcacacatgtagtttctacttatgctagaactgagaagttctagtgggctgag 60

                                                                       
Query: 388 aaagaaaataagttcttggttcatcctcaatggatatatgatgcttattgtttttggcaa 447
           |||||||| |||||||||||||||||||| |||||||||||| ||||||||| |||||||
Sbjct: 61  aaagaaaagaagttcttggttcatcctcactggatatatgatacttattgttgttggcaa 120

                                                                       
Query: 448 aagccacctgagacgaactacatttgcaaaaacattgatagggaaaggaagaaaacaggg 507
           |||| ||||||| ||||||||||||| |||||  |||||||         ||||||||||
Sbjct: 121 aagcaacctgaggcgaactacatttgtaaaaaatttgatag---------gaaaacaggg 171

                                                                       
Query: 508 ccagacaccaccacagagggtggtgcgacaaccattactgccagtgattcagccgcacag 567
           || || ||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 172 cctgataccaccacagagggtggtgcgacaaccattactgccactgattcagccgcgcag 231

                      
Query: 568 ccaagggaact 578
           |||| ||||||
Sbjct: 232 ccaatggaact 242


>gnl|LJGI|TC61634 similar to UniRef100_A7QD70 Cluster: Chromosome undetermined
           scaffold_80, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_80, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (56%)
          Length = 867

 Score =  234 bits (118), Expect = 5e-61
 Identities = 328/398 (82%)
 Strand = Plus / Plus

                                                                       
Query: 54  ttgcaaatcccttgcagaaatgaaggttgatgaacaagaaactacaggagtacttgcaag 113
           ||||||||||||| | |||  ||||  ||||||| | ||||||   |||| |||||||||
Sbjct: 296 ttgcaaatccctttctgaatcgaagagtgatgaagatgaaactgatggagcacttgcaag 355

                                                                       
Query: 114 aatgctcaacgtgctcaagcaagtccacttcacattctttgacaaacttgaagaagatta 173
           | | ||||| |||||||| |||||||||| ||||||||||||||||||||||||||||  
Sbjct: 356 agttctcaatgtgctcaaacaagtccactgcacattctttgacaaacttgaagaagatct 415

                                                                       
Query: 174 tgttgatcgagatgtccggaaggttgtgtcatcacttcgaagtgaagtcttaagcgggtg 233
           |||||||||||||||  |||||||| |||||||| |||||||||||||||||||||| ||
Sbjct: 416 tgttgatcgagatgtaaggaaggttttgtcatcagttcgaagtgaagtcttaagcggatg 475

                                                                       
Query: 234 tgtgatcgttttcttccgtactaagcctgcaccattaccatttctccaggagattgcaat 293
           |||||||||||||  ||| | |  || | || |||||||   |||| || |||| |||  
Sbjct: 476 tgtgatcgttttcagccgaattttgcattcagcattacctgctctcaagaagatggcaga 535

                                                                       
Query: 294 gcagatgggagccacttgtatggagaaacttgacccctcagtcacacatgtagtttctac 353
           || ||||||||| |||||| ||    | ||||||||||| || |||||||||||| ||||
Sbjct: 536 gcggatgggagctacttgtttgacagagcttgacccctctgtgacacatgtagttgctac 595

                                                                       
Query: 354 taaggctagaactgagaagttccagtgggctgagaaagaaaataagttcttggttcatcc 413
             | ||| |||||||||||| || |||||| | ||||||||| ||||| |||||||||||
Sbjct: 596 cgatgctggaactgagaagtcccggtgggcagtgaaagaaaagaagtttttggttcatcc 655

                                                 
Query: 414 tcaatggatatatgatgcttattgtttttggcaaaagc 451
           |  ||||||| | | |||  ||| ||||||||||||||
Sbjct: 656 tagatggatagaagctgcaaattatttttggcaaaagc 693


>gnl|LJGI|TC72817 similar to UniRef100_Q9FJL6 Cluster: Gb|AAD25584.1; n=2; Arabidopsis
            thaliana|Rep: Gb|AAD25584.1 - Arabidopsis thaliana
            (Mouse-ear cress), partial (17%)
          Length = 1250

 Score = 87.7 bits (44), Expect = 8e-17
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                        
Query: 100  ggagtacttgcaagaatgctcaacgtgctcaagcaagtccacttcacattctttgacaaa 159
            |||| |||||||||| | ||||| ||||| || |||||||||| ||||||||||||||||
Sbjct: 1178 ggagcacttgcaagagttctcaatgtgctaaaacaagtccactgcacattctttgacaaa 1237

                        
Query: 160  cttgaagaagat 171
            ||||||||||||
Sbjct: 1238 cttgaagaagat 1249