Miyakogusa Predicted Gene

Lj0g3v0205889.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0205889.1 tr|I7MPD6|I7MPD6_COXBE 30S ribosomal protein S6
OS=Coxiella burnetii 'MSU Goat Q177' GN=rpsF PE=3
SV,48.48,8e-19,Ribosomal protein S6,Ribosomal protein S6;
Ribosomal_S6,Ribosomal protein S6, plastid/chloroplast; S,CUFF.13156.1
         (807 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71069 similar to UniRef100_A2Q664 Cluster: Ribosomal ...  1600   0.0  

>gnl|LJGI|TC71069 similar to UniRef100_A2Q664 Cluster: Ribosomal protein S6; n=1;
           Medicago truncatula|Rep: Ribosomal protein S6 - Medicago
           truncatula (Barrel medic), partial (67%)
          Length = 1145

 Score = 1600 bits (807), Expect = 0.0
 Identities = 807/807 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaggcactgtttcagggttcatgtcttgctccttcttatcctctactcgagcttcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43  atggaggcactgtttcagggttcatgtcttgctccttcttatcctctactcgagcttcca 102

                                                                       
Query: 61  aaatccaccaccatgttaaccaactgcgtcaagttcaatctcagtcacaacccatgcttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 aaatccaccaccatgttaaccaactgcgtcaagttcaatctcagtcacaacccatgcttc 162

                                                                       
Query: 121 atcttcgcaaattcttcacggccattttctgctcagagtaagcccagaaaaccattttca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 atcttcgcaaattcttcacggccattttctgctcagagtaagcccagaaaaccattttca 222

                                                                       
Query: 181 gtcatcgtgaatgcccagaagaaggacaagaaagaagatcaccatagcttcgtatccaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gtcatcgtgaatgcccagaagaaggacaagaaagaagatcaccatagcttcgtatccaaa 282

                                                                       
Query: 241 cctgatgagtctgctggtttcttccctgaagctgtgcttcttaaaaagaaaatagttgag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 cctgatgagtctgctggtttcttccctgaagctgtgcttcttaaaaagaaaatagttgag 342

                                                                       
Query: 301 gaagatggtgagtttctcccggagttcgaagatgctgaagaaagaaaactatttgaatcg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gaagatggtgagtttctcccggagttcgaagatgctgaagaaagaaaactatttgaatcg 402

                                                                       
Query: 361 ttgatgcttgaaatggacagtgatctgaacgttgaattattgcgccactacgagattgtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttgatgcttgaaatggacagtgatctgaacgttgaattattgcgccactacgagattgtt 462

                                                                       
Query: 421 tacttgattcatgagaagcatgaagaagaggttgcagcagtcaatgagaaaattcaagac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tacttgattcatgagaagcatgaagaagaggttgcagcagtcaatgagaaaattcaagac 522

                                                                       
Query: 481 tttttgagggagaagaaaggcacggtgtggagattcagtgattggggtatgagaacgctg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tttttgagggagaagaaaggcacggtgtggagattcagtgattggggtatgagaacgctg 582

                                                                       
Query: 541 gcttataagataaagaaagctaataaggctcactacattttgatgaacattgagatggat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gcttataagataaagaaagctaataaggctcactacattttgatgaacattgagatggat 642

                                                                       
Query: 601 gctaaatacatcaacgagttcaagactttgttggaccaagatgaaagagttattcggcat 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gctaaatacatcaacgagttcaagactttgttggaccaagatgaaagagttattcggcat 702

                                                                       
Query: 661 ctcgtggtaaagagggatgaggcaatcactgaagattgccctcctccacccgagtttcat 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ctcgtggtaaagagggatgaggcaatcactgaagattgccctcctccacccgagtttcat 762

                                                                       
Query: 721 actctgggtgcaagtgtggacgatgacgacgacgaagaacttgatgaagattatgatgat 780
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 actctgggtgcaagtgtggacgatgacgacgacgaagaacttgatgaagattatgatgat 822

                                      
Query: 781 gattgggatggtgaagaggatgcggat 807
           |||||||||||||||||||||||||||
Sbjct: 823 gattgggatggtgaagaggatgcggat 849