Miyakogusa Predicted Gene

Lj0g3v0205839.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0205839.1 tr|G7I5Y4|G7I5Y4_MEDTR Lysine-specific histone
demethylase-like protein OS=Medicago truncatula GN=MT,68.8,0,AMINE
OXIDASE,NULL; SWIRM,SWIRM domain; no description,Winged
helix-turn-helix transcription repress,CUFF.13150.1
         (4467 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP074264 homologue to UniRef100_A7NT09 Cluster: Chromos...    92   4e-17
gnl|LJGI|TC69362                                                       84   9e-15

>gnl|LJGI|BP074264 homologue to UniRef100_A7NT09 Cluster: Chromosome chr18 scaffold_1,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr18 scaffold_1, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (3%)
          Length = 514

 Score = 91.7 bits (46), Expect = 4e-17
 Identities = 171/211 (81%), Gaps = 5/211 (2%)
 Strand = Plus / Minus

                                                                        
Query: 4159 catactagccgtgacattcgtgctatagcaagccagttggtcaatgtatggcttgaagtt 4218
            |||||||||||||| ||||| |||| |||| |||||||||| | ||||||||||||||| 
Sbjct: 439  catactagccgtgatattcgagctacagca-gccagttggttagtgtatggcttgaagtc 381

                                                                        
Query: 4219 ttccgcaagggaaaaggttctaatggggggttaaagttgtcga----ggcaagcatgtac 4274
            |||||||||| |||||  |||||||||||  ||||| |||| |    | ||||||  |  
Sbjct: 380  ttccgcaaggaaaaagcatctaatgggggactaaagctgtcaagatcgacaagcaactgt 321

                                                                        
Query: 4275 tgtagatttatcaaagagaaaatctataaaagattcagcctcaggaaagcctcccatggg 4334
            ||||| | ||| |||||||||||||||  |||||||||| |  |||||||| ||| || |
Sbjct: 320  tgtagttatattaaagagaaaatctattgaagattcagcatttggaaagccacccctgag 261

                                           
Query: 4335 cacacatcagggtatcgttgagaataaagga 4365
            | |||||||  ||| | ||| ||||||||||
Sbjct: 260  cccacatcatagtacctttgggaataaagga 230


>gnl|LJGI|TC69362 
          Length = 698

 Score = 83.8 bits (42), Expect = 9e-15
 Identities = 170/211 (80%), Gaps = 5/211 (2%)
 Strand = Plus / Plus

                                                                        
Query: 4159 catactagccgtgacattcgtgctatagcaagccagttggtcaatgtatggcttgaagtt 4218
            |||||||||||||| ||||| |||| | || |||||||||| | ||||||||||||||| 
Sbjct: 245  catactagccgtgatattcgagctacaaca-gccagttggttagtgtatggcttgaagtc 303

                                                                        
Query: 4219 ttccgcaagggaaaaggttctaatggggggttaaagttgtcga----ggcaagcatgtac 4274
            ||||||| || |||||  |||||||||||  ||||| |||| |    | ||||||  |  
Sbjct: 304  ttccgcatggaaaaagcatctaatgggggactaaagctgtcaagatcgacaagcaactgt 363

                                                                        
Query: 4275 tgtagatttatcaaagagaaaatctataaaagattcagcctcaggaaagcctcccatggg 4334
            ||||| | ||| |||||||||||||||  |||||||||| |  |||||||| ||| || |
Sbjct: 364  tgtagttatattaaagagaaaatctattgaagattcagcatttggaaagccacccctgag 423

                                           
Query: 4335 cacacatcagggtatcgttgagaataaagga 4365
            | |||||||  ||| | ||||||||||||||
Sbjct: 424  cccacatcacagtacctttgagaataaagga 454