Miyakogusa Predicted Gene
- Lj0g3v0205479.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0205479.1 Non Chatacterized Hit- tr|J3M6T5|J3M6T5_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB05G2,43.32,0.00000000000001,seg,NULL,CUFF.13128.1
(990 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70072 886 0.0
gnl|LJGI|AV413827 135 6e-31
>gnl|LJGI|TC70072
Length = 2080
Score = 886 bits (447), Expect = 0.0
Identities = 447/447 (100%)
Strand = Plus / Plus
Query: 228 tggcagcagctcatccttcaacagcgacctcgccatcttccccgactgcgactcctcccg 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggcagcagctcatccttcaacagcgacctcgccatcttccccgactgcgactcctcccg 380
Query: 288 ccccagctccgtcgcagaggacgacgagctcaagcgacttcacatccacaacagcaacga 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccccagctccgtcgcagaggacgacgagctcaagcgacttcacatccacaacagcaacga 440
Query: 348 caacaacccattattccaacccaacatcaagaaaactcacaagtacttctccctctccag 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caacaacccattattccaacccaacatcaagaaaactcacaagtacttctccctctccag 500
Query: 408 attctcctctgttttccgcaaggaaaacgtcgccaagacccgagacccggaaaacgcaac 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attctcctctgttttccgcaaggaaaacgtcgccaagacccgagacccggaaaacgcaac 560
Query: 468 tggttcctcggtgaagcgaatgagcgccaccgcgaaagaggttatcaggaagtacttgaa 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggttcctcggtgaagcgaatgagcgccaccgcgaaagaggttatcaggaagtacttgaa 620
Query: 528 gaaggtgaagcctctgtacgataagctctcacagtcgcagtcacagagacaggggagaac 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaaggtgaagcctctgtacgataagctctcacagtcgcagtcacagagacaggggagaac 680
Query: 588 aggggatttgtcggtgagaacaggggatttgacggtggagggatcgattttgtctctgct 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aggggatttgtcggtgagaacaggggatttgacggtggagggatcgattttgtctctgct 740
Query: 648 ggcgaaaacagagagatctgggaagga 674
|||||||||||||||||||||||||||
Sbjct: 741 ggcgaaaacagagagatctgggaagga 767
Score = 557 bits (281), Expect = e-158
Identities = 281/281 (100%)
Strand = Plus / Plus
Query: 704 tggaaagtggtggcggtgctggtaagagaggttggaaagagaacgtgggtgtgctttctc 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 tggaaagtggtggcggtgctggtaagagaggttggaaagagaacgtgggtgtgctttctc 856
Query: 764 attcattttcagggaacctgagatacccgcgaaggagaaggtgcgtttcgagttgccctt 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 attcattttcagggaacctgagatacccgcgaaggagaaggtgcgtttcgagttgccctt 916
Query: 824 cttcgatgcggtcatcaccgagccactccggcttgctctctcagaagggggtccctgccg 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 cttcgatgcggtcatcaccgagccactccggcttgctctctcagaagggggtccctgccg 976
Query: 884 gcgttggtggaagagacaattcctccatggaagagttgcagagcgcaatccaaggtgcca 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 gcgttggtggaagagacaattcctccatggaagagttgcagagcgcaatccaaggtgcca 1036
Query: 944 tcgcgcattgcaagaactctttgattcagagcaaaacaggg 984
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 tcgcgcattgcaagaactctttgattcagagcaaaacaggg 1077
Score = 135 bits (68), Expect = 6e-31
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 1 atggctaggggaagaggcaaagcttcaaaatcctacactctcccttcaacaccctctcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 atggctaggggaagaggcaaagcttcaaaatcctacactctcccttcaacaccctctcac 108
Query: 61 tcttcttc 68
||||||||
Sbjct: 109 tcttcttc 116
Score = 95.6 bits (48), Expect = 5e-19
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 67 tcttccaccgcactctgccctgccgatgaactcttctacaaaggccag 114
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 tcttccaccgcactctgccctgccgatgaactcttctacaaaggccag 207
>gnl|LJGI|AV413827
Length = 371
Score = 135 bits (68), Expect = 6e-31
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 1 atggctaggggaagaggcaaagcttcaaaatcctacactctcccttcaacaccctctcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 atggctaggggaagaggcaaagcttcaaaatcctacactctcccttcaacaccctctcac 138
Query: 61 tcttcttc 68
||||||||
Sbjct: 139 tcttcttc 146
Score = 95.6 bits (48), Expect = 5e-19
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 67 tcttccaccgcactctgccctgccgatgaactcttctacaaaggccag 114
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tcttccaccgcactctgccctgccgatgaactcttctacaaaggccag 237