Miyakogusa Predicted Gene
- Lj0g3v0205409.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0205409.1 Non Chatacterized Hit- tr|I1KJ49|I1KJ49_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41272
PE,44.35,2e-18,Zinc finger domain,Zinc finger, RanBP2-type; seg,NULL;
zf-RanBP,Zinc finger, RanBP2-type; ZF_RANBP2_,CUFF.13118.1
(1533 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67136 weakly similar to UniRef100_A7P3U3 Cluster: Chr... 1453 0.0
gnl|LJGI|FS356568 similar to UniRef100_A7P3U3 Cluster: Chromosom... 1197 0.0
gnl|LJGI|TC70249 similar to UniRef100_A7P3U3 Cluster: Chromosome... 605 e-172
>gnl|LJGI|TC67136 weakly similar to UniRef100_A7P3U3 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (31%)
Length = 791
Score = 1453 bits (733), Expect = 0.0
Identities = 742/745 (99%)
Strand = Plus / Plus
Query: 1 atgaaacgcaatatgatccgaaacctattgaaacatggtcaccacccacgttgggctcgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 atgaaacgcaatatgatccgaaacctattgaaacatggtcaccacccacgttgggctcgc 106
Query: 61 gcgtttctcagctcctccccactctctcacagcgtggccagtccagcttcgaagctaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gcgtttctcagctcctccccactctctcacagcgtggccagtccagcttcgaagctaaac 166
Query: 121 gaggttgaagaagaatggagatggaagagggaagaatcagaacccgcggttcaggtctcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 gaggttgaagaagaatggagatggaagagggaagaatcagaacccgcggttcaggtctcg 226
Query: 181 catccttggcccgaatgggtcggtttgatggagtgcttgctcaagaatggatacttccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 catccttggcccgaatgggtcggtttgatggagtgcttgctcaagaatggatacttccat 286
Query: 241 gctgaaggaaaccccttcaagaatgctgatataggagccaaagaggccaatgttattaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gctgaaggaaaccccttcaagaatgctgatataggagccaaagaggccaatgttattaga 346
Query: 301 actgcgtgcttgaattttgggagagaccactttgatcttgtaagggttttgtctcgaaaa 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 347 actgcgtgcttgaattttgggagaggccactttgatcttgtaagggttttgtctcgaaaa 406
Query: 361 gatatagcatctactgtagtatttggatgtccaagcttagataggaaagtgatcaactct 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 407 gatatagcatctactgtagtatttggatgtccaagcttagataggaaagcgatcaactct 466
Query: 421 ggaaagcgtctgagagcatatttgggcattgatgagggaaatgtgtgcagctcgtgcaat 480
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ggaaagcgtctgggagcatatttgggcattgatgagggaaatgtgtgcagctcgtgcaat 526
Query: 481 ttgagaggggactgtgaaagggcctttgtgaacgcacgtgaagatgaaggtggaagaact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ttgagaggggactgtgaaagggcctttgtgaacgcacgtgaagatgaaggtggaagaact 586
Query: 541 gtggatgttatgcgtattattttaacttatgggcttgactcaattattgcttcggtggag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gtggatgttatgcgtattattttaacttatgggcttgactcaattattgcttcggtggag 646
Query: 601 aacaagccatgtctgaagaaacaggtaacagaatctgtgagaagactgctgaaagaaata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 aacaagccatgtctgaagaaacaggtaacagaatctgtgagaagactgctgaaagaaata 706
Query: 661 gttgaccacagtaatgaagacaaaaattctaattttccagacaccacagaggctgtcaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gttgaccacagtaatgaagacaaaaattctaattttccagacaccacagaggctgtcaat 766
Query: 721 gaacaagtccaccccaatctgcaag 745
|||||||||||||||||||||||||
Sbjct: 767 gaacaagtccaccccaatctgcaag 791
>gnl|LJGI|FS356568 similar to UniRef100_A7P3U3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (16%)
Length = 774
Score = 1197 bits (604), Expect = 0.0
Identities = 616/620 (99%)
Strand = Plus / Minus
Query: 914 actggatatgcaataaatgcaacttcctaaattttgcaaggaacacaagatgtttgctat 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 actggatatgcaataaatgcaacttcctaaattttgcaaggaacacaagatgtttgctat 715
Query: 974 gcaaagagaacccttctaatcgtcaaattaatccaggggagtgggaatgtgactcctgca 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 gcaaagagaacccttctaatcgtcaaattaatccaggggagtgggaatgtgactcctgca 655
Query: 1034 actacattaacttcagaagaaacatggcttgcttgaaatgtgatcatagacgacctaaga 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 actacattaacttcagaagaaacatggcttgcttgaaatgtgatcatagacgacctaaga 595
Query: 1094 tgtcaaatgcttcaaacactcctcaacaagagcaagaagttaaaaacaaccacaagaata 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tgtcaaatgcttcaaacactcctcaacaagagcaagaagttaaaaacaaccacaagaata 535
Query: 1154 gaaaattcgtggaagatcggcgtgatagtagtgacgaatcatcaacgatgtcagaaagaa 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gaaaattcgtggaagatcggcgtgatagtagtgacgaatcatcaacgatgtcagaaagaa 475
Query: 1214 agaacaggaatagagagcggagatttgtggaggatggaactgaaaatcacaagtgcttaa 1273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 agaacaggaatagagagcggagatttgtggaggatggaactgaaaatcacaagtgcttaa 415
Query: 1274 atagttcgaattatcctgttcaaattttagattttcctattgctggaggtaagtctgagt 1333
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 414 atagttcgaattatcctgttcaaattttagattttcctattgctggaggtaagtttgagt 355
Query: 1334 tgtctgagccactaaggagagaagaatataagaataaggctctaacagagagcaaaatgc 1393
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 354 tgtttgagccactaaggagagaagaatataagaataaggctctaaaagagagcaaaatgc 295
Query: 1394 atttgtggcaaagtgaatcagatgatgagttttgttctgctcataacttgagtactgatg 1453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 atttgtggcaaagtgaatcagatgatgagttttgttctgctcataacttgagtactgatg 235
Query: 1454 atgagttttgttctgctgataacttgagcactgatgatgaagagatggccgaatggtttg 1513
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 atgagttttgttttgctgataacttgagcactgatgatgaagagatggccgaatggtttg 175
Query: 1514 gaaataataagaaataaagg 1533
||||||||||||||||||||
Sbjct: 174 gaaataataagaaataaagg 155
>gnl|LJGI|TC70249 similar to UniRef100_A7P3U3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 562
Score = 605 bits (305), Expect = e-172
Identities = 305/305 (100%)
Strand = Plus / Plus
Query: 41 accacccacgttgggctcgcgcgtttctcagctcctccccactctctcacagcgtggcca 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 accacccacgttgggctcgcgcgtttctcagctcctccccactctctcacagcgtggcca 61
Query: 101 gtccagcttcgaagctaaacgaggttgaagaagaatggagatggaagagggaagaatcag 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gtccagcttcgaagctaaacgaggttgaagaagaatggagatggaagagggaagaatcag 121
Query: 161 aacccgcggttcaggtctcgcatccttggcccgaatgggtcggtttgatggagtgcttgc 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aacccgcggttcaggtctcgcatccttggcccgaatgggtcggtttgatggagtgcttgc 181
Query: 221 tcaagaatggatacttccatgctgaaggaaaccccttcaagaatgctgatataggagcca 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tcaagaatggatacttccatgctgaaggaaaccccttcaagaatgctgatataggagcca 241
Query: 281 aagaggccaatgttattagaactgcgtgcttgaattttgggagagaccactttgatcttg 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aagaggccaatgttattagaactgcgtgcttgaattttgggagagaccactttgatcttg 301
Query: 341 taagg 345
|||||
Sbjct: 302 taagg 306