Miyakogusa Predicted Gene

Lj0g3v0205379.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0205379.1 Non Chatacterized Hit- tr|I1LWI0|I1LWI0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.38,0.00000001,
,CUFF.13113.1
         (169 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW595777 weakly similar to UniRef100_Q5BIZ7 Cluster: Tr...   268   1e-71
gnl|LJGI|AV779789                                                     100   5e-21

>gnl|LJGI|BW595777 weakly similar to UniRef100_Q5BIZ7 Cluster: Trim47_predicted
           protein; n=2; Rattus norvegicus|Rep: Trim47_predicted
           protein - Rattus, partial (3%)
          Length = 490

 Score =  268 bits (135), Expect = 1e-71
 Identities = 138/139 (99%)
 Strand = Plus / Minus

                                                                       
Query: 2   tgttaggaccccattgcaaggtatgggacttgagtcccacattggaagtatgggattcta 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgttaggaccccattgcaaggtatgggacttgagtcccacattggaagtatgggattcta 362

                                                                       
Query: 62  atgtggggtttataaggtcttgggctctccaactacaacagctagcttttgtggtgtggt 121
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgtggggtttataaggccttgggctctccaactacaacagctagcttttgtggtgtggt 302

                              
Query: 122 tctcccaaggttcttatca 140
           |||||||||||||||||||
Sbjct: 301 tctcccaaggttcttatca 283


>gnl|LJGI|AV779789 
          Length = 560

 Score = 99.6 bits (50), Expect = 5e-21
 Identities = 80/90 (88%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgttaggaccccattgcaaggtatgggacttgagtcccacattggaagtatgggattct 60
           |||||||||||| || |||||||||||||||||||||||||| ||  |||||| ||||||
Sbjct: 538 atgttaggacccaatcgcaaggtatgggacttgagtcccacactgacagtatgagattct 479

                                         
Query: 61  aatgtggggtttataaggtcttgggctctc 90
           ||||| |||||||||||  ||| |||||||
Sbjct: 478 aatgtcgggtttataagaccttaggctctc 449