Miyakogusa Predicted Gene
- Lj0g3v0205169.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0205169.1 Non Chatacterized Hit- tr|F6HIM4|F6HIM4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,31.58,1e-16,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; DUF573,Protein of unknown functio,CUFF.13105.1
(921 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74574 1509 0.0
gnl|LJGI|BW616436 weakly similar to UniRef100_Q8AWA4 Cluster: Ke... 662 0.0
gnl|LJGI|TC70626 509 e-144
gnl|LJGI|AV770472 similar to UniRef100_UPI0000F329F3 Cluster: PM... 252 3e-66
gnl|LJGI|GO024984 similar to UniRef100_Q2U6N8 Cluster: Predicted... 115 5e-25
gnl|LJGI|TC71904 similar to UniRef100_A0R3H9 Cluster: Type I ant... 115 5e-25
gnl|LJGI|TC81749 similar to UniRef100_Q6BY19 Cluster: Debaryomyc... 90 3e-17
gnl|LJGI|TC81457 similar to UniRef100_A7USI0 Cluster: AGAP000318... 90 3e-17
gnl|LJGI|FS319837 similar to UniRef100_Q9LS49 Cluster: Genomic D... 88 1e-16
>gnl|LJGI|TC74574
Length = 1691
Score = 1509 bits (761), Expect = 0.0
Identities = 795/812 (97%)
Strand = Plus / Plus
Query: 1 atggcacagaagcagaagcgcccttctcctctcgaagatccacccaccgcgtcttcctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 atggcacagaagcagaagcgcccttctcctctcgaagatccacccaccgcgtcttcctcc 144
Query: 61 tccgaatcagaggaggaagatgaccaacctctctctcaagtaaaacacgcagcagcagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tccgaatcagaggaggaagatgaccaacctctctctcaagtaaaacacgcagcagcagaa 204
Query: 121 gaagaagaactttcctcagaagaagaaggttcctctnnnnnnnnnnnnnnnnntgaaacc 180
|||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 205 gaagaagaactttcctcagaagaagaaggttcctctgaggaggaggaggaggatgaaacc 264
Query: 181 accgctccagcccctccggcagccacaacctcccacaccaaacctcctcaacccgaaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 accgctccagcccctccggcagccacaacctcccacaccaaacctcctcaacccgaaccc 324
Query: 241 gaatccgattccgccacccaatccgattctgagtccgacaccgactccgaccaggccccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaatccgattccgccacccaatccgattctgagtccgacaccgactccgaccaggccccc 384
Query: 301 tccgcatccgctcccactcctaaccctaaagtcaaacccctcgccaccaagcccatggac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tccgcatccgctcccactcctaaccctaaagtcaaacccctcgccaccaagcccatggac 444
Query: 361 cagacccagacccacaagcccaaggctcaaccctccccggctccggccaaatcggcagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cagacccagacccacaagcccaaggctcaaccctccccggctccggccaaatcggcagcc 504
Query: 421 aagcgcgccgccgagagcaatgccaacgccggagactccaaacgggctaagaagaaggca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagcgcgccgccgagagcaatgccaacgccggagactccaaacgggctaagaagaaggca 564
Query: 481 gttgactcggcccccgccgccgccgctggttccgatgaggagatggaggaggacgggaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gttgactcggcccccgccgccgccgctggttccgatgaggagatggaggaggacgggaag 624
Query: 541 aagtccgggaacgactccaagaagcagtttacgagattgtggtccgatgaggatgagatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aagtccgggaacgactccaagaagcagtttacgagattgtggtccgatgaggatgagatc 684
Query: 601 gccattctcaaggggcttgctgatttcatttcgaaaactgggaatgacccgttgaagtac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gccattctcaaggggcttgctgatttcatttcgaaaactgggaatgacccgttgaagtac 744
Query: 661 cctgatgctttttacgatttcgttatcaggtcgcttcaagctgatgctacccgcactcag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cctgatgctttttacgatttcgttatcaggtcgcttcaagctgatgctacccgcactcag 804
Query: 721 gtgaaggataaggttcgaaggctgaagaagaagtttcagacccttgcaggcaaagggaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gtgaaggataaggttcgaaggctgaagaagaagtttcagacccttgcaggcaaagggaag 864
Query: 781 aatggagagacccccaaattccccaaagtcca 812
||||||||||||||||||||||||||||||||
Sbjct: 865 aatggagagacccccaaattccccaaagtcca 896
Score = 131 bits (66), Expect = 8e-30
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 829 ggagccaatgaagcagcagccgcggaagagaagccgaaggctaatggcaaacctgcaaag 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 ggagccaatgaagcagcagccgcggaagagaagccgaaggctaatggcaaacctgcaaag 999
Query: 889 agtccc 894
||||||
Sbjct: 1000 agtccc 1005
Score = 56.0 bits (28), Expect = 4e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 894 ctgcaaagaaagcgaaaggcgaagctag 921
||||||||||||||||||||||||||||
Sbjct: 1046 ctgcaaagaaagcgaaaggcgaagctag 1073
>gnl|LJGI|BW616436 weakly similar to UniRef100_Q8AWA4 Cluster: Keratin alpha 2; n=1;
Lampetra fluviatilis|Rep: Keratin alpha 2 - Lampetra
fluviatilis (River lamprey), partial (5%)
Length = 473
Score = 662 bits (334), Expect = 0.0
Identities = 368/385 (95%)
Strand = Plus / Plus
Query: 76 gaagatgaccaacctctctctcaagtaaaacacgcagcagcagaagaagaagaactttcc 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 gaagatgaccaacctctctctcaagtaaaacacgcagcagcagaagaagaagaactttcc 148
Query: 136 tcagaagaagaaggttcctctnnnnnnnnnnnnnnnnntgaaaccaccgctccagcccct 195
||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 149 tcagaagaagaaggttcctctgaggaggaggaggaggatgaaaccaccgctccagcccct 208
Query: 196 ccggcagccacaacctcccacaccaaacctcctcaacccgaacccgaatccgattccgcc 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ccggcagccacaacctcccacaccaaacctcctcaacccgaacccgaatccgattccgcc 268
Query: 256 acccaatccgattctgagtccgacaccgactccgaccaggccccctccgcatccgctccc 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 acccaatccgattctgagtccgacaccgactccgaccaggccccctccgcatccgctccc 328
Query: 316 actcctaaccctaaagtcaaacccctcgccaccaagcccatggaccagacccagacccac 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 actcctaaccctaaagtcaaacccctcgccaccaagcccatggaccagacccagacccac 388
Query: 376 aagcccaaggctcaaccctccccggctccggccaaatcggcagccaagcgcgccgccgag 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aagcccaaggctcaaccctccccggctccggccaaatcggcagccaagcgcgccgccgag 448
Query: 436 agcaatgccaacgccggagactcca 460
|||||||||||||||||||||||||
Sbjct: 449 agcaatgccaacgccggagactcca 473
Score = 77.8 bits (39), Expect = 1e-13
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 1 atggcacagaagcagaagcgcccttctcctctcgaagat 39
|||||||||||||||||||||||||||||||||||||||
Sbjct: 56 atggcacagaagcagaagcgcccttctcctctcgaagat 94
>gnl|LJGI|TC70626
Length = 917
Score = 509 bits (257), Expect = e-144
Identities = 260/261 (99%)
Strand = Plus / Plus
Query: 552 cgactccaagaagcagtttacgagattgtggtccgatgaggatgagatcgccattctcaa 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cgactccaagaagcagtttacgagattgtggtccgatgaggatgagatcgccattctcaa 61
Query: 612 ggggcttgctgatttcatttcgaaaactgggaatgacccgttgaagtaccctgatgcttt 671
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 62 ggggcttgctgatttcatttcgaaaactgggaatgactcgttgaagtaccctgatgcttt 121
Query: 672 ttacgatttcgttatcaggtcgcttcaagctgatgctacccgcactcaggtgaaggataa 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttacgatttcgttatcaggtcgcttcaagctgatgctacccgcactcaggtgaaggataa 181
Query: 732 ggttcgaaggctgaagaagaagtttcagacccttgcaggcaaagggaagaatggagagac 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ggttcgaaggctgaagaagaagtttcagacccttgcaggcaaagggaagaatggagagac 241
Query: 792 ccccaaattccccaaagtcca 812
|||||||||||||||||||||
Sbjct: 242 ccccaaattccccaaagtcca 262
Score = 131 bits (66), Expect = 8e-30
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 829 ggagccaatgaagcagcagccgcggaagagaagccgaaggctaatggcaaacctgcaaag 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ggagccaatgaagcagcagccgcggaagagaagccgaaggctaatggcaaacctgcaaag 365
Query: 889 agtccc 894
||||||
Sbjct: 366 agtccc 371
Score = 56.0 bits (28), Expect = 4e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 894 ctgcaaagaaagcgaaaggcgaagctag 921
||||||||||||||||||||||||||||
Sbjct: 412 ctgcaaagaaagcgaaaggcgaagctag 439
>gnl|LJGI|AV770472 similar to UniRef100_UPI0000F329F3 Cluster: PML-RARA-regulated
adapter molecule 1 (PRAM-1) (PRAM).; n=1; Bos
taurus|Rep: PML-RARA-regulated adapter molecule 1
(PRAM-1) (PRAM). - Bos Taurus, partial (5%)
Length = 263
Score = 252 bits (127), Expect = 3e-66
Identities = 232/249 (93%), Gaps = 16/249 (6%)
Strand = Plus / Plus
Query: 217 accaaacctcctcaacccgaacccgaatccgattccgccacccaatccga-ttctgag-t 274
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 25 accaaacctcctcaacccgaacccgaatccgattccgccacccaatccgagttctgagat 84
Query: 275 ccga-caccg--actcc-gaccaggccccctccgcatccgctcccactcctaaccctaaa 330
|||| |||| ||||| |||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 85 ccgaacacccgcactcccgaccaggccccctccgcatccgctccca-tcctaacc-taaa 142
Query: 331 gtcaaacccctcgccaccaagcccatggaccagacccagacccacaagcccaaggctcaa 390
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 143 gtcaaacccctcgccaccaagcccatggaccagacccaga-ccacaagcccaaggctcaa 201
Query: 391 ccctccccggctccggccaaatcggcagccaagcgcgccgccgagagcaatgccaacgcc 450
||||||||||||||||| |||||| |||| ||||||||| ||| ||||||||||| |||
Sbjct: 202 ccctccccggctccggc--aatcgg-agcc-agcgcgccg-cga-agcaatgccaa-gcc 254
Query: 451 ggagactcc 459
|||||||||
Sbjct: 255 ggagactcc 263
>gnl|LJGI|GO024984 similar to UniRef100_Q2U6N8 Cluster: Predicted protein; n=1;
Aspergillus oryzae|Rep: Predicted protein - Aspergillus
oryzae, partial (6%)
Length = 641
Score = 115 bits (58), Expect = 5e-25
Identities = 85/94 (90%)
Strand = Plus / Plus
Query: 588 tgaggatgagatcgccattctcaaggggcttgctgatttcatttcgaaaactgggaatga 647
||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 88 tgaggatgagacggccattctgaagggccttgctgagttcatttcgaaaacagggaatga 147
Query: 648 cccgttgaagtaccctgatgctttttacgatttc 681
||||||||||||| |||||| ||||||||||||
Sbjct: 148 cccgttgaagtacggtgatgcattttacgatttc 181
>gnl|LJGI|TC71904 similar to UniRef100_A0R3H9 Cluster: Type I antifreeze protein;
n=1; Mycobacterium smegmatis str. MC2 155|Rep: Type I
antifreeze protein - Mycobacterium smegmatis (strain
ATCC 700084 / mc(2)155), partial (21%)
Length = 719
Score = 115 bits (58), Expect = 5e-25
Identities = 85/94 (90%)
Strand = Plus / Minus
Query: 588 tgaggatgagatcgccattctcaaggggcttgctgatttcatttcgaaaactgggaatga 647
||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 291 tgaggatgagacggccattctgaagggccttgctgagttcatttcgaaaacagggaatga 232
Query: 648 cccgttgaagtaccctgatgctttttacgatttc 681
||||||||||||| |||||| ||||||||||||
Sbjct: 231 cccgttgaagtacggtgatgcattttacgatttc 198
>gnl|LJGI|TC81749 similar to UniRef100_Q6BY19 Cluster: Debaryomyces hansenii
chromosome A of strain CBS767 of Debaryomyces hansenii;
n=1; Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii),
partial (6%)
Length = 931
Score = 89.7 bits (45), Expect = 3e-17
Identities = 81/93 (87%)
Strand = Plus / Plus
Query: 589 gaggatgagatcgccattctcaaggggcttgctgatttcatttcgaaaactgggaatgac 648
|||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||| ||
Sbjct: 526 gaggatgagacggccattctaaagggccttgctgagttcatttcgaaaacagggaaggat 585
Query: 649 ccgttgaagtaccctgatgctttttacgatttc 681
||||||||| || ||||||||||||| |||||
Sbjct: 586 ccgttgaagcacggtgatgctttttacaatttc 618
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 413 cggcagccaagcgcgccgccgagagcaatgccaacgccg 451
|||||||||||||||| ||||||| ||||||| ||||||
Sbjct: 395 cggcagccaagcgcgctgccgagaacaatgccgacgccg 433
>gnl|LJGI|TC81457 similar to UniRef100_A7USI0 Cluster: AGAP000318-PA; n=1; Anopheles
gambiae str. PEST|Rep: AGAP000318-PA - Anopheles gambiae
str. PEST, partial (12%)
Length = 916
Score = 89.7 bits (45), Expect = 3e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 8 agaagcagaagcgcccttctcctctcgaagatccacccaccgcgtcttcctcctccg 64
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agaagcagaatttcccttctcctctcgaagatccacccaccgcgtcttcctcctccg 379
>gnl|LJGI|FS319837 similar to UniRef100_Q9LS49 Cluster: Genomic DNA, chromosome 3, P1
clone: MYF24; n=1; Arabidopsis thaliana|Rep: Genomic
DNA, chromosome 3, P1 clone: MYF24 - Arabidopsis
thaliana (Mouse-ear cress), partial (86%)
Length = 810
Score = 87.7 bits (44), Expect = 1e-16
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 21 cccttctcctctcgaagatccacccaccgcgtcttcctcctccg 64
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 cccttctcctctcgaagatccacccaccgcgtcttcctcctccg 570