Miyakogusa Predicted Gene

Lj0g3v0205009.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0205009.1 Non Chatacterized Hit- tr|Q9SV86|Q9SV86_ARATH
Putative uncharacterized protein AT4g10360
OS=Arabidop,37.7,2e-19,SUBFAMILY NOT NAMED,NULL; CT120 PROTEIN,NULL;
TRAM_LAG1_CLN8,TRAM/LAG1/CLN8 homology domain; TLC,TRA,CUFF.13082.1
         (450 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC593846 weakly similar to UniRef100_A7QV45 Cluster: Ch...   696   0.0  

>gnl|LJGI|DC593846 weakly similar to UniRef100_A7QV45 Cluster: Chromosome undetermined
           scaffold_185, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_185,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (35%)
          Length = 596

 Score =  696 bits (351), Expect = 0.0
 Identities = 351/351 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctgcaatgttggattctaaagaaattatggatctcaaatcttaccagaaccaggct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atggctgcaatgttggattctaaagaaattatggatctcaaatcttaccagaaccaggct 305

                                                                       
Query: 61  aatatcttcgtgaaggagtatatactagcagactctctggttccgtacacttctgttatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aatatcttcgtgaaggagtatatactagcagactctctggttccgtacacttctgttatt 365

                                                                       
Query: 121 ggtggcatttttgcttgcaaaatggtctacgatcttattcatgttattggtactaattac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ggtggcatttttgcttgcaaaatggtctacgatcttattcatgttattggtactaattac 425

                                                                       
Query: 181 tttaagagctattccagctttgcaaaactccaacgtattgagtggaataaccgagctata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tttaagagctattccagctttgcaaaactccaacgtattgagtggaataaccgagctata 485

                                                                       
Query: 241 tcaactatccatgccattttcataacagctatggcattacactacgttttttgctcagat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tcaactatccatgccattttcataacagctatggcattacactacgttttttgctcagat 545

                                                              
Query: 301 ctatttgctgacgaccagtctactgaacttattacacttcgaaactcttca 351
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ctatttgctgacgaccagtctactgaacttattacacttcgaaactcttca 596