Miyakogusa Predicted Gene

Lj0g3v0204989.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0204989.1 Non Chatacterized Hit- tr|I1N112|I1N112_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7168
PE=,58.9,0,mTERF,Mitochodrial transcription termination
factor-related; seg,NULL; SUBFAMILY NOT NAMED,NULL; FAM,CUFF.13080.1
         (1204 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80289                                                      700   0.0  
gnl|LJGI|TC77410 weakly similar to UniRef100_A7NW61 Cluster: Chr...   438   e-122

>gnl|LJGI|TC80289 
          Length = 399

 Score =  700 bits (353), Expect = 0.0
 Identities = 353/353 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtgcctaattccctcattgcaaggttaacttcatcattctcatactacaagtgtagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47  atggtgcctaattccctcattgcaaggttaacttcatcattctcatactacaagtgtagc 106

                                                                       
Query: 61  agaatccaattgagttctgtgtttcatcacaatgctttccctttttccttcaattcattc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 agaatccaattgagttctgtgtttcatcacaatgctttccctttttccttcaattcattc 166

                                                                       
Query: 121 agttcatgcacctcatcatctgactctgaatcagatgcagactactgcaaaggtgacacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 agttcatgcacctcatcatctgactctgaatcagatgcagactactgcaaaggtgacacc 226

                                                                       
Query: 181 tatacgatttcttacctaaccaaatcatgtgggttgtctccagattcagccaagaagctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tatacgatttcttacctaaccaaatcatgtgggttgtctccagattcagccaagaagctc 286

                                                                       
Query: 241 tctatagggttgaacttgaaagacccagatggcccaaatgctgttcttgatcttctcaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tctatagggttgaacttgaaagacccagatggcccaaatgctgttcttgatcttctcaaa 346

                                                                
Query: 301 aactatggcttctccaaaacccaggttgcaaagcttgtagggaaacacccctt 353
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aactatggcttctccaaaacccaggttgcaaagcttgtagggaaacacccctt 399


>gnl|LJGI|TC77410 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
            scaffold_2, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (4%)
          Length = 437

 Score =  438 bits (221), Expect = e-122
 Identities = 235/242 (97%)
 Strand = Plus / Plus

                                                                        
Query: 963  agatgttgctggatttcctcctgttctaggcttcagcttggagaagaggattatccctag 1022
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    agatgttgctggatttcctcctgttctaggcttcagcttggagaagaggattatccctag 60

                                                                        
Query: 1023 gctctcagtaatcaaagtcttgaaatcaaaaggcctgatcaagaatgatatgcacttaag 1082
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gctctcagtaatcaaagtcttgaaatcaaaaggcctgatcaagaatgatatgcacttaag 120

                                                                        
Query: 1083 ttcctttatgtgctcatctgaggaagnnnnnnngaagaaatttgtcatcaattttcagga 1142
            ||||||||||||||||||||||||||       |||||||||||||||||||||||||||
Sbjct: 121  ttcctttatgtgctcatctgaggaagtttttttgaagaaatttgtcatcaattttcagga 180

                                                                        
Query: 1143 cgatgcgcctttactaacagatgtctacaaaggtttgattgatcatcaggatgtgattta 1202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  cgatgcgcctttactaacagatgtctacaaaggtttgattgatcatcaggatgtgattta 240

              
Query: 1203 gt 1204
            ||
Sbjct: 241  gt 242