Miyakogusa Predicted Gene
- Lj0g3v0203669.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0203669.1 tr|A9RIG4|A9RIG4_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_159272,31.87,0.22, ,CUFF.12989.1
(531 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58914 1053 0.0
gnl|LJGI|TC61202 698 0.0
gnl|LJGI|GO035866 492 e-138
>gnl|LJGI|TC58914
Length = 805
Score = 1053 bits (531), Expect = 0.0
Identities = 531/531 (100%)
Strand = Plus / Plus
Query: 1 atgagattcataggagcactgaggaacattgttcgtcctctgtctctctcatcaccaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 atgagattcataggagcactgaggaacattgttcgtcctctgtctctctcatcaccaaga 226
Query: 61 accttaccttcacaaatctgcaccaatcctactacgactgcattgttggaatctccttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 accttaccttcacaaatctgcaccaatcctactacgactgcattgttggaatctccttgc 286
Query: 121 aaattgccccaatggcttttccctcttcggaatcacttccatagcttgacggacactcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 aaattgccccaatggcttttccctcttcggaatcacttccatagcttgacggacactcgc 346
Query: 181 ttcccgaagagacgaccctctgataaaccccgtcgaaagagggctagtttgagaccccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ttcccgaagagacgaccctctgataaaccccgtcgaaagagggctagtttgagaccccct 406
Query: 241 gggccttatgcttgggttcaatacacacctggtgagcctatacttccaaataagccaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gggccttatgcttgggttcaatacacacctggtgagcctatacttccaaataagccaaat 466
Query: 301 gaagggagtgtcaagcgaaggaatgagaagaaacgcgtgaggcagcaccgagcctttgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gaagggagtgtcaagcgaaggaatgagaagaaacgcgtgaggcagcaccgagcctttgta 526
Query: 361 ttggcggagaggaagaaaaggaaagctcagctgcaagaggctaaccggaagaaaagcatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ttggcggagaggaagaaaaggaaagctcagctgcaagaggctaaccggaagaaaagcatt 586
Query: 421 aagaaggtagagcgtaaaatggctgcagttgcaagggaaagagagtgggcagagaggctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 aagaaggtagagcgtaaaatggctgcagttgcaagggaaagagagtgggcagagaggctg 646
Query: 481 gctgaattgcaacgacttgagaaagagaagaaaaattctattgcttaattt 531
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gctgaattgcaacgacttgagaaagagaagaaaaattctattgcttaattt 697
>gnl|LJGI|TC61202
Length = 792
Score = 698 bits (352), Expect = 0.0
Identities = 491/539 (91%), Gaps = 15/539 (2%)
Strand = Plus / Plus
Query: 5 gattcataggagcactgaggaacattgttcgtcctctgtctctctcatcaccaagaacct 64
||||||||||||| |||||||||||| |||| ||| ||||||||||| || | |||||||
Sbjct: 130 gattcataggagccctgaggaacattattcgccctttgtctctctcaacatctagaacct 189
Query: 65 taccttcacaaatctgcaccaatcctactacgactgcattgtt------------ggaat 112
|| |||||||||||| |||||||||||| || ||||||||| || ||
Sbjct: 190 taacttcacaaatctccaccaatcctac---gattgcattgttttctacttctttggcat 246
Query: 113 ctccttgcaaattgccccaatggcttttccctcttcggaatcacttccatagcttgacgg 172
||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 247 ctccttgcaaacagccccaatggcttttcccccttcggaatcacttccatagcttgacgg 306
Query: 173 acactcgcttcccgaagagacgaccctctgataaaccccgtcgaaagagggctagtttga 232
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 307 acacacgcttccctaagagacgaccctctgataaaccccgtcgaaagagggctagcttga 366
Query: 233 gaccccctgggccttatgcttgggttcaatacacacctggtgagcctatacttccaaata 292
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 367 gaccccctgggccttatgcttgggttcaatacacacctggtgaacccatacttccaaata 426
Query: 293 agccaaatgaagggagtgtcaagcgaaggaatgagaagaaacgcgtgaggcagcaccgag 352
| ||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||| |
Sbjct: 427 aaccaaacgaagggagtgtcaagagaaggaatgagaagaaacgcatgaggcagcaccgtg 486
Query: 353 cctttgtattggcggagaggaagaaaaggaaagctcagctgcaagaggctaaccggaaga 412
||||| ||||||| || ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 487 cctttatattggctgaaaggaagaaaaggaaagctcagatgcaagaggctaaccggaaga 546
Query: 413 aaagcattaagaaggtagagcgtaaaatggctgcagttgcaagggaaagagagtgggcag 472
|||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 547 aaagcattaagagagtagagcgtaaaatggctgcagttgcaagggaaagagcgtgggcag 606
Query: 473 agaggctggctgaattgcaacgacttgagaaagagaagaaaaattctattgcttaattt 531
||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 607 agaggctggctgaattgcagcgacttgagaaagagaagaaaaattctatggcttaattt 665
>gnl|LJGI|GO035866
Length = 759
Score = 492 bits (248), Expect = e-138
Identities = 281/287 (97%), Gaps = 5/287 (1%)
Strand = Plus / Plus
Query: 241 gggccttatgcttgggttcaatacacacctggtgagcctatacttccaaataagccaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gggccttatgcttgggttcaatacacacctggtgagcctatacttccaaataagccaaat 479
Query: 301 gaagggagtgtcaagcgaaggaatgagaagaaacgcgtgaggcagcaccgagcctttgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gaagggagtgtcaagcgaaggaatgagaagaaacgcgtgaggcagcaccgagcctttgta 539
Query: 361 ttggcggagaggaagaaaaggaaagctcagctgcaagaggctaaccggaagaaaagcatt 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ttggcggagaggaag-aaaggaaagctcagctgcaagaggctaaccggaagaaaagcatt 598
Query: 421 aagaaggtagagcgtaaaatggctgcagttgcaagggaaagagagtgggcagagaggctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 aagaaggtagagcgtaaaatggctgcagttgcaagggaaagagagtgggcagagaggctg 658
Query: 481 gctgaattgcaacgacttgagaaagagaagaaaaattctattgctta 527
|||| ||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 659 gctg-attgc-acgacttgagaaagaga--gaaaattctattgctta 701
Score = 464 bits (234), Expect = e-130
Identities = 240/242 (99%)
Strand = Plus / Plus
Query: 1 atgagattcataggagcactgaggaacattgttcgtcctctgtctctctcatcaccaaga 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 atgagattcataggagcattgaggaacattgttcgtcctctgtctctctcatcaccaaga 153
Query: 61 accttaccttcacaaatctgcaccaatcctactacgactgcattgttggaatctccttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 accttaccttcacaaatctgcaccaatcctactacgactgcattgttggaatctccttgc 213
Query: 121 aaattgccccaatggcttttccctcttcggaatcacttccatagcttgacggacactcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aaattgccccaatggcttttccctcttcggaatcacttccatagcttgacggacactcgc 273
Query: 181 ttcccgaagagacgaccctctgataaaccccgtcgaaagagggctagtttgagaccccct 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 274 ttcccgaagagacgaccctctgataaaccccgtcgaaagagggttagtttgagaccccct 333
Query: 241 gg 242
||
Sbjct: 334 gg 335