Miyakogusa Predicted Gene
- Lj0g3v0203469.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0203469.1 Non Chatacterized Hit- tr|C6T741|C6T741_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,42.75,4e-19,seg,NULL,CUFF.12976.1
(597 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76043 weakly similar to UniRef100_Q89376 Cluster: A41... 1126 0.0
gnl|LJGI|TC76272 349 1e-95
>gnl|LJGI|TC76043 weakly similar to UniRef100_Q89376 Cluster: A41R protein; n=1;
Paramecium bursaria Chlorella virus 1|Rep: A41R protein
- Paramecium bursaria Chlorella virus 1 (PBCV-1),
partial (12%)
Length = 935
Score = 1126 bits (568), Expect = 0.0
Identities = 588/597 (98%)
Strand = Plus / Plus
Query: 1 atgagaaatccttccactctccaacgcgcttttgttctcttctgccttcccttgttgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 atgagaaatccttccactctccaacgcgcttttgttctcttctgccttcccttgttgctt 143
Query: 61 gttgccaccttcggttatgctactgaggtttcagggaatgaagtgaagacagatgggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 gttgccaccttcggttatgctactgaggtttcagggaatgaagtgaagacagatgggaag 203
Query: 121 gttgcacaagaagaggtagcaaagacaagccaagaaggaccaaatgaagaagcaaaattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gttgcacaagaagaggtagcaaagacaagccaagaaggaccaaatgaagaagcaaaattc 263
Query: 181 aagggctttttccatcataaaccaataatattcaagaagccttttccatttgtgaagcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aagggctttttccatcataaaccaataatattcaagaagccttttccatttgtgaagcct 323
Query: 241 atcccaaagccatttccctttgttaagcccatccacaagccctttccatttgttaagaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atcccaaagccatttccctttgttaagcccatccacaagccctttccatttgttaagaag 383
Query: 301 cctatcccaaaaccaatctttgtgaagaaacctatacctttttacaagcctgtgccaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctatcccaaaaccaatctttgtgaagaaacctatacctttttacaagcctgtgccaaag 443
Query: 361 gtaattcctgttctgaaaccaattcccatttataagcctgtgccaaaggtaattcctgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtaattcctgttctgaaaccaattcccatttataagcctgtgccaaaggtaattcctgtt 503
Query: 421 cccatttataagcctgtgccgaagttcattcctgttgtgaaaccaattcccattttgaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cccatttataagcctgtgccgaagttcattcctgttgtgaaaccaattcccattttgaag 563
Query: 481 cctgtgccaaaggtaattcctattgtgaagccaattccnnnnnnnaagcctgtaccaaag 540
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 564 cctgtgccaaaggtaattcctattgtgaagccaattcctttttttaagcctgtacctaag 623
Query: 541 gtgattcctattgttaagcctatccctattcacaagccaagtccaactccataaggt 597
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 624 gtgattcctattgttaagcctatccctattcacaagccaattccaactccataaggt 680
>gnl|LJGI|TC76272
Length = 618
Score = 349 bits (176), Expect = 1e-95
Identities = 225/235 (95%), Gaps = 5/235 (2%)
Strand = Plus / Plus
Query: 245 caaagccatttccctttgttaagcccatccacaagccctttccatttgttaagaagccta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 caaagccatttccctttgttaagcccatccacaagccctttccatttgttaagaagccta 282
Query: 305 tcccaaaaccaatctttgtgaagaaacctatacctttttacaagcctgtgcc-aaaggta 363
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 283 tcccaaaaccaatctttgtgaanaaacctatacctttttacaagcctgtgccaaaaggta 342
Query: 364 attcctgttctgaaaccaatt-cccatttataagcctgtgccaaaggtaattcctgttcc 422
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 343 attcctgttctgaaaccaattccccatttataaacctgtgccaaaggtaattcctgttcc 402
Query: 423 catttataagcctgtgccgaagttcattcctgttgtg-aaaccaattcccatttt 476
|||| |||| |||||||| || |||| |||||||||| |||||||||||||||||
Sbjct: 403 cattaataa-cctgtgcccaaattca-tcctgttgtgtaaaccaattcccatttt 455
Score = 258 bits (130), Expect = 3e-68
Identities = 144/146 (98%), Gaps = 2/146 (1%)
Strand = Plus / Plus
Query: 1 atgagaaatccttccactctccaacgcgcttttgttctcttctgccttcccttgttgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 atgagaaatccttccactctccaacgcgcttttgttctcttctgccttcccttgttgctt 141
Query: 61 gttgccaccttcggttatgctactgaggtttcaggg-aatgaagtgaagacagatgggaa 119
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 142 gttgccaccttcggttatgctactgaggtttcagggaaatgaagtgaagacagatgggaa 201
Query: 120 ggttgcacaag-aagaggtagcaaag 144
||||||||||| ||||||||||||||
Sbjct: 202 ggttgcacaagaaagaggtagcaaag 227
Score = 61.9 bits (31), Expect = 4e-09
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 448 attcctgttgtgaaaccaattccc-attttgaagcctgtgccaaaggtaattcct 501
||||||||| |||||||||||||| |||| || |||||||||||||||||||||
Sbjct: 343 attcctgttctgaaaccaattccccatttataaacctgtgccaaaggtaattcct 397