Miyakogusa Predicted Gene
- Lj0g3v0203099.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0203099.1 Non Chatacterized Hit- tr|I3SIN5|I3SIN5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.48,0,UBC-like,Ubiquitin-conjugating enzyme/RWD-like;
UQ_con,Ubiquitin-conjugating enzyme, E2; no descript,CUFF.12943.1
(480 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60083 homologue to UniRef100_A7PLF0 Cluster: Ubiquiti... 936 0.0
gnl|LJGI|TC59305 homologue to UniRef100_Q8L5P9 Cluster: Ubiquiti... 513 e-145
gnl|LJGI|BW597857 homologue to UniRef100_Q8L5P9 Cluster: Ubiquit... 165 3e-40
>gnl|LJGI|TC60083 homologue to UniRef100_A7PLF0 Cluster: Ubiquitin carrier protein;
n=1; Vitis vinifera|Rep: Ubiquitin carrier protein -
Vitis vinifera (Grape), partial (98%)
Length = 908
Score = 936 bits (472), Expect = 0.0
Identities = 478/480 (99%)
Strand = Plus / Plus
Query: 1 atggctggtattgctcgtggacgcctcaccgaggagcggaagtcatggcggaagaaccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggctggtattgctcgtggacgcctcaccgaggagcggaagtcatggcggaagaaccac 189
Query: 61 ccccatggttttgtggcgaagccggaggcgctgtctgatggtagcatcaatttgatggtt 120
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 190 ccccatggttttgtggcgaagccggagacgctgtctgatggtaccatcaatttgatggtt 249
Query: 121 tggcattgcactattcctggaaaaactgggactgattgggatggtggctacttccctctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tggcattgcactattcctggaaaaactgggactgattgggatggtggctacttccctctt 309
Query: 181 acactacactttagtgaggactaccctagcaagcctccgaagtgtaaattcccacaaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 acactacactttagtgaggactaccctagcaagcctccgaagtgtaaattcccacaaggt 369
Query: 241 ttcttccaccctaatgtttatccatcaggaactgtttgcttgtctatacttaatgaggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttcttccaccctaatgtttatccatcaggaactgtttgcttgtctatacttaatgaggat 429
Query: 301 agtgggtggagaccggccattacagtgaagcaaattcttgtgggcatccaagacttactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 agtgggtggagaccggccattacagtgaagcaaattcttgtgggcatccaagacttactt 489
Query: 361 gaccagccaaatcctgctgatcctgcccagacagaaggctatcatctattcatccaggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gaccagccaaatcctgctgatcctgcccagacagaaggctatcatctattcatccaggat 549
Query: 421 gtagcagagtataagagaagggtccaacagcaggcaaagctattcccacctcttgtctag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gtagcagagtataagagaagggtccaacagcaggcaaagctattcccacctcttgtctag 609
>gnl|LJGI|TC59305 homologue to UniRef100_Q8L5P9 Cluster: Ubiquitin carrier protein;
n=2; Populus|Rep: Ubiquitin carrier protein - Populus
canadensis (Canadian poplar) (Populus deltoides x
Populusnigra), complete
Length = 891
Score = 513 bits (259), Expect = e-145
Identities = 421/475 (88%)
Strand = Plus / Plus
Query: 6 tggtattgctcgtggacgcctcaccgaggagcggaagtcatggcggaagaaccaccccca 65
|||||||||||||||||||||| |||||||| | |||||||||||||||||||| |||||
Sbjct: 155 tggtattgctcgtggacgcctcgccgaggagagaaagtcatggcggaagaaccatcccca 214
Query: 66 tggttttgtggcgaagccggaggcgctgtctgatggtagcatcaatttgatggtttggca 125
|||||| || || ||||| ||| ||| ||||||| | | ||||| ||||||| |||||
Sbjct: 215 tggtttcgttgccaagcccgagacgcaacctgatggcaccgtcaatatgatggtctggca 274
Query: 126 ttgcactattcctggaaaaactgggactgattgggatggtggctacttccctcttacact 185
||||||||||||||| |||||||||||||||||||| ||| || | ||| || || |
Sbjct: 275 ttgcactattcctggcaaaactgggactgattgggaaaatgggtattaccccctgacgat 334
Query: 186 acactttagtgaggactaccctagcaagcctccgaagtgtaaattcccacaaggtttctt 245
||||| ||||| |||||||||||||||||||| ||||| || ||||| || ||||||||
Sbjct: 335 gcacttcagtgaagactaccctagcaagcctccaaagtgcaagttccctcagggtttctt 394
Query: 246 ccaccctaatgtttatccatcaggaactgtttgcttgtctatacttaatgaggatagtgg 305
|||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 395 ccaccctaatgtatatccatctggaactgtttgcttgtccatacttaatgaggatagtgg 454
Query: 306 gtggagaccggccattacagtgaagcaaattcttgtgggcatccaagacttacttgacca 365
||||||||| || || || |||||||||||||| ||||||||||||||| | ||||| ||
Sbjct: 455 gtggagaccagctataactgtgaagcaaattctagtgggcatccaagacctgcttgatca 514
Query: 366 gccaaatcctgctgatcctgcccagacagaaggctatcatctattcatccaggatgtagc 425
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 515 gccaaatcctgctgaccctgcccagacagaaggctatcatctattcatccaggatgcaac 574
Query: 426 agagtataagagaagggtccaacagcaggcaaagctattcccacctcttgtctag 480
|||||||||||||||||||| ||||||||||||| || ||||||||||||||||
Sbjct: 575 agagtataagagaagggtccggcagcaggcaaagcaatacccacctcttgtctag 629
>gnl|LJGI|BW597857 homologue to UniRef100_Q8L5P9 Cluster: Ubiquitin carrier protein;
n=2; Populus|Rep: Ubiquitin carrier protein - Populus
canadensis (Canadian poplar) (Populus deltoides x
Populusnigra), partial (59%)
Length = 477
Score = 165 bits (83), Expect = 3e-40
Identities = 152/175 (86%)
Strand = Plus / Plus
Query: 107 tcaatttgatggtttggcattgcactattcctggaaaaactgggactgattgggatggtg 166
||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 303 tcaatatgatggtctggcattgcactattcctggcaaaactgggactgattgggaaaatg 362
Query: 167 gctacttccctcttacactacactttagtgaggactaccctagcaagcctccgaagtgta 226
| || | ||| || || | ||||| ||||| |||||||||||||||||||| ||||| |
Sbjct: 363 ggtattaccccctgacgatgcacttcagtgaagactaccctagcaagcctccaaagtgca 422
Query: 227 aattcccacaaggtttcttccaccctaatgtttatccatcaggaactgtttgctt 281
| ||||| || |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 423 agttccctcagggtttcttccaccctaatgtatatccatctggaactgtttgctt 477
Score = 83.8 bits (42), Expect = 9e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 6 tggtattgctcgtggacgcctcaccgaggagcggaagtcatggcggaagaaccaccccca 65
|||||||||||||||||||||| ||||||| | |||||||||||||||||||| |||||
Sbjct: 103 tggtattgctcgtggacgcctccccgaggaaagaaagtcatggcggaagaaccatcccca 162
Query: 66 tg 67
||
Sbjct: 163 tg 164