Miyakogusa Predicted Gene
- Lj0g3v0202099.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0202099.3 Non Chatacterized Hit- tr|I1K9S7|I1K9S7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20231 PE,58.16,0,A
Receptor for Ubiquitination Targets,F-box domain, cyclin-like;
seg,NULL; F-box domain,F-box domain,CUFF.12850.3
(1101 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP071245 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 331 5e-90
gnl|LJGI|BP063614 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 331 5e-90
gnl|LJGI|TC65637 similar to UniRef100_A2Q574 Cluster: Cyclin-lik... 178 5e-44
gnl|LJGI|TC72353 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 167 2e-40
gnl|LJGI|FS344820 weakly similar to UniRef100_A2Q574 Cluster: Cy... 143 3e-33
gnl|LJGI|TC73420 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 131 1e-29
gnl|LJGI|TC61828 similar to UniRef100_A2Q574 Cluster: Cyclin-lik... 86 5e-16
gnl|LJGI|GO023715 weakly similar to UniRef100_A2Q574 Cluster: Cy... 80 3e-14
gnl|LJGI|FS347988 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 60 3e-08
gnl|LJGI|TC75251 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 60 3e-08
gnl|LJGI|BI420296 weakly similar to UniRef100_A2Q574 Cluster: Cy... 54 2e-06
>gnl|LJGI|BP071245 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (13%)
Length = 552
Score = 331 bits (167), Expect = 5e-90
Identities = 173/175 (98%)
Strand = Plus / Plus
Query: 35 agagggagagtgaaaatgaagagaacaaagatagacttagtgacttgcctgattgcgttc 94
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 353 agagtgagagtgaaaatgaagagaacaaagatagactcagtgacttgcctgattgcgttc 412
Query: 95 tccttcacattctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattatcca 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tccttcacattctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattatcca 472
Query: 155 caagatggaaggatctctggaaacgtcttccttccctcatactacattcctcaga 209
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 caagatggaaggatctctggaaacgtcttccttccctcatactacattcctcaga 527
>gnl|LJGI|BP063614 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 508
Score = 331 bits (167), Expect = 5e-90
Identities = 296/339 (87%)
Strand = Plus / Plus
Query: 45 tgaaaatgaagagaacaaagatagacttagtgacttgcctgattgcgttctccttcacat 104
|||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 148 tgaaaatgaagataacaaagatagactcagtgacttgcctgattgcattctccttcacat 207
Query: 105 tctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattatccacaagatggaa 164
||| ||||||||||| ||||| || ||||||||||||| ||| ||||||||||||||
Sbjct: 208 tctatcatttgtgaaagccaaagccgcggttcaaacttgcatattgtccacaagatggaa 267
Query: 165 ggatctctggaaacgtcttccttccctcatactacattcctcagacttctttacactgaa 224
||||||||||||||||||||||||||||||||||| |||||| |||| | ||| ||
Sbjct: 268 ggatctctggaaacgtcttccttccctcatactactgtcctcaaacttttggacatataa 327
Query: 225 gagctttgccaaatttgtgtctaggcttttgactcttcgcgatggctcaactgcgctcaa 284
|||||| ||||||| |||||| ||||||||||||||||||||||||| || ||||| |
Sbjct: 328 gagcttcaccaaattcgtgtctcggcttttgactcttcgcgatggctcgaccgcgctgca 387
Query: 285 gggtcttgattttaaccgttattgtttcattcagcctcacctccttgaaaggattgtaaa 344
||||| |||||| | | | || || |||||||||||||||||| |||||||||||||
Sbjct: 388 cggtctagattttgagcatgatggtcacattcagcctcacctcctcaaaaggattgtaaa 447
Query: 345 atatgctgtttcacacaatgtccagcaaataggattgtc 383
|||||||||||||||||||||||| | | ||||||||||
Sbjct: 448 atatgctgtttcacacaatgtccaacgattaggattgtc 486
>gnl|LJGI|TC65637 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (13%)
Length = 732
Score = 178 bits (90), Expect = 5e-44
Identities = 198/234 (84%)
Strand = Plus / Plus
Query: 40 gagagtgaaaatgaagagaacaaagatagacttagtgacttgcctgattgcgttctcctt 99
|||||||| | | ||| |||||| || || |||||||| ||||| ||||||||||| |||
Sbjct: 230 gagagtgagagtaaagtgaacaatgacaggcttagtgatttgcccgattgcgttctgctt 289
Query: 100 cacattctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattatccacaaga 159
|||||| ||||||||||||| |||| | |||||||||||||||||| |||||||||||||
Sbjct: 290 cacattttgtcatttgtgaaagccaggaatgcagttcaaacttgcatattatccacaaga 349
Query: 160 tggaaggatctctggaaacgtcttccttccctcatactacattcctcagacttctttaca 219
||||||||||| |||||| |||||||||| ||||| ||| |||| ||||||| | |||
Sbjct: 350 tggaaggatctatggaaaagtcttccttcgctcattttactttccccagacttttcgaca 409
Query: 220 ctgaagagctttgccaaatttgtgtctaggcttttgactcttcgcgatggctca 273
|||||| || ||||||| ||||||| ||||||| ||||| |||||||||
Sbjct: 410 ttgaagattttcaccaaattcgtgtctaagcttttggaacttcgtgatggctca 463
>gnl|LJGI|TC72353 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (37%)
Length = 1467
Score = 167 bits (84), Expect = 2e-40
Identities = 221/267 (82%), Gaps = 6/267 (2%)
Strand = Plus / Plus
Query: 706 tcttctccaagccttcgtaccttagcctttaagggtcgtgttttagtgactctcactgga 765
||||||||||| ||||||||||| ||||||| ||| | ||| | |||| || ||||
Sbjct: 903 tcttctccaagtcttcgtacctttgcctttacgggcactccttttgagactatctgtgga 962
Query: 766 agaaatctttcttccattgagcatgtaaatttggaaatatggtcgaac------aagtat 819
|||||| ||||||||||||||||||||||||| || ||| | ||| ||||||
Sbjct: 963 agaaatatttcttccattgagcatgtaaattttgatatacattggaagtgtgaaaagtat 1022
Query: 820 tctttgattctacttagctggctgctagaccttgccaatataaaatcattgacagtctac 879
||||| |||||||||||||||||| |||||||| ||||||||||||||||||| || | |
Sbjct: 1023 tcttttattctacttagctggctggtagaccttaccaatataaaatcattgacggtttcc 1082
Query: 880 tcaagtactcttgaggttctctcctccattcctgatatactggagcttaagtatcctatc 939
||||||||||| |||||||| ||| |||||| || | | ||| |||||||||||||
Sbjct: 1083 acaagtactcttcaggttctcatctcaattcctcatttgttagagtataagtatcctatc 1142
Query: 940 ttgggtggcttgaagtcattgaaagtt 966
|||||| ||||||||||||||||||||
Sbjct: 1143 ttgggtagcttgaagtcattgaaagtt 1169
Score = 105 bits (53), Expect = 6e-22
Identities = 125/149 (83%)
Strand = Plus / Plus
Query: 233 ccaaatttgtgtctaggcttttgactcttcgcgatggctcaactgcgctcaagggtcttg 292
||||||| |||||| | ||| |||||||||||||| ||||||| ||||| | ||||| |
Sbjct: 406 ccaaattcgtgtctcgccttctgactcttcgcgatcgctcaaccgcgctgcacggtctag 465
Query: 293 attttaaccgttattgtttcattcagcctcacctccttgaaaggattgtaaaatatgctg 352
||||| | ||| | ||| ||||||||||||||||| ||||||||||||| ||||| |
Sbjct: 466 attttgagcgtcttggttgtattcagcctcacctcctcaaaaggattgtaaagtatgccg 525
Query: 353 tttcacacaatgtccagcaaataggattg 381
||||||||||||| |||| | ||||||||
Sbjct: 526 tttcacacaatgtgcagcgattaggattg 554
Score = 65.9 bits (33), Expect = 5e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 473 tatttccagaatctcttaatttgccagcattaactacattgcatctagtgaattttg 529
||||||| ||||||||| |||||||||| ||||||| |||||| ||||||||||||
Sbjct: 667 tatttccgaaatctcttagtttgccagcactaactaccttgcatttagtgaattttg 723
Score = 60.0 bits (30), Expect = 3e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 1017 attttcacttataccttatggaatagtggactttttgcttcaaaactcgccgtccgcgaa 1076
||||||| |||||| |||||| |||||||| ||||||||||||||| || || || ||
Sbjct: 1193 attttcatctataccggatggaacagtggactatttgcttcaaaactcaccctctgccaa 1252
Query: 1077 ggttgacgtcataa 1090
||||||| ||||||
Sbjct: 1253 ggttgacatcataa 1266
>gnl|LJGI|FS344820 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (24%)
Length = 859
Score = 143 bits (72), Expect = 3e-33
Identities = 141/164 (85%)
Strand = Plus / Plus
Query: 15 gaatccgaagagaggaaggaagagggagagtgaaaatgaagagaacaaagatagacttag 74
|||| |||||||||||||||| || |||| |||||||||||| |||||||| || || ||
Sbjct: 128 gaatgcgaagagaggaaggaacagtgagaatgaaaatgaagacaacaaagacaggctcag 187
Query: 75 tgacttgcctgattgcgttctccttcacattctgtcatttgtgaatgccaagtatgcagt 134
|||| | |||||| || |||||||||||||| | |||||| |||||||||| ||||||||
Sbjct: 188 tgaccttcctgatggcattctccttcacattttatcatttatgaatgccaaatatgcagt 247
Query: 135 tcaaacttgcacattatccacaagatggaaggatctctggaaac 178
|||||| || | ||||| | ||||||||||||||||||||||
Sbjct: 248 tcaaacatgtatcttatcggctagatggaaggatctctggaaac 291
Score = 60.0 bits (30), Expect = 3e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 233 ccaaatttgtgtctaggcttttgactcttcgcgatggctcaactgc 278
||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 337 ccaaatttgtgtctacaattttgactcttcgggatggctcaactgc 382
Score = 52.0 bits (26), Expect = 7e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 490 aatttgccagcattaactacattgcatctagtgaattt 527
||||||||||||||||| || |||||||| ||||||||
Sbjct: 597 aatttgccagcattaaccaccttgcatctggtgaattt 634
>gnl|LJGI|TC73420 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (23%)
Length = 714
Score = 131 bits (66), Expect = 1e-29
Identities = 126/146 (86%)
Strand = Plus / Plus
Query: 40 gagagtgaaaatgaagagaacaaagatagacttagtgacttgcctgattgcgttctcctt 99
|||| ||||| |||||| |||||||| || || |||||||||| ||||||| ||||||||
Sbjct: 174 gagactgaaattgaagacaacaaagacaggctcagtgacttgcatgattgcattctcctt 233
Query: 100 cacattctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattatccacaaga 159
|||||| |||||||| ||| ||||| || ||||||| ||| |||| ||||||| ||||
Sbjct: 234 cacattttgtcatttctgagcgccaaatacgcagttcgaacatgcatgttatccaaaaga 293
Query: 160 tggaaggatctctggaaacgtcttcc 185
|||||||||||||||||||| |||||
Sbjct: 294 tggaaggatctctggaaacgccttcc 319
>gnl|LJGI|TC61828 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1; Medicago
truncatula|Rep: Cyclin-like F-box - Medicago truncatula
(Barrel medic), partial (6%)
Length = 881
Score = 85.7 bits (43), Expect = 5e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 1027 ataccttatggaatagtggactttttgcttcaaaactcgccgtccgcgaaggttgacgtc 1086
|||||| ||||| ||||||||||||| |||||||||||||||||||| ||||||||| ||
Sbjct: 520 atacctgatggagtagtggactttttacttcaaaactcgccgtccgctaaggttgacatc 579
Query: 1087 ata 1089
|||
Sbjct: 580 ata 582
Score = 73.8 bits (37), Expect = 2e-12
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 821 ctttgattctacttagctggctgctagaccttgccaatataaaatcattgacagtctact 880
|||||||| |||| ||||||||| |||| ||| |||||||||||||||||||||| |
Sbjct: 245 ctttgattttactgagctggctggtagagcttaccaatataaaatcattgacagtatctg 304
Query: 881 caagtactcttgaggttctct 901
|||| |||||| |||||||||
Sbjct: 305 caagaactcttcaggttctct 325
>gnl|LJGI|GO023715 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 555
Score = 79.8 bits (40), Expect = 3e-14
Identities = 115/140 (82%)
Strand = Plus / Plus
Query: 40 gagagtgaaaatgaagagaacaaagatagacttagtgacttgcctgattgcgttctcctt 99
|||| ||||| |||||||||| |||| || || |||||||| || |||||| | ||||||
Sbjct: 165 gagaatgaaattgaagagaacgaagacaggctaagtgacttacccgattgcatcctcctt 224
Query: 100 cacattctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattatccacaaga 159
||| || |||||||| |||| ||| |||||||| |||| || ||||||||||||
Sbjct: 225 cactttttgtcatttctgaacgccggacgtgcagttcgaactaccatgttatccacaaga 284
Query: 160 tggaaggatctctggaaacg 179
|||||| |||||||||||||
Sbjct: 285 tggaagaatctctggaaacg 304
>gnl|LJGI|FS347988 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1; Medicago
truncatula|Rep: Cyclin-like F-box - Medicago truncatula
(Barrel medic), partial (5%)
Length = 536
Score = 60.0 bits (30), Expect = 3e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 1035 tggaatagtggactttttgcttcaaaactc 1064
||||||||||||||||||||||||||||||
Sbjct: 461 tggaatagtggactttttgcttcaaaactc 432
>gnl|LJGI|TC75251 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 718
Score = 60.0 bits (30), Expect = 3e-08
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 821 ctttgattctacttagctggctgctagaccttgccaatataaaatcattgacagtctact 880
||||| ||||||| ||||||||| ||| ||| | ||||| ||||||||||||||||
Sbjct: 53 ctttggttctactcagctggctggaagagcttactaatatcaaatcattgacagtctcta 112
Query: 881 caagtactcttgaggttctctcctccattcctga 914
||| ||||||| ||||||||| || ||||||||
Sbjct: 113 caaatactcttcaggttctcttcttaattcctga 146
Score = 60.0 bits (30), Expect = 3e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1035 tggaatagtggactttttgcttcaaaactc 1064
||||||||||||||||||||||||||||||
Sbjct: 351 tggaatagtggactttttgcttcaaaactc 380
>gnl|LJGI|BI420296 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (15%)
Length = 592
Score = 54.0 bits (27), Expect = 2e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 151 tccacaagatggaaggatctctggaaa 177
|||||||||||||||||||||||||||
Sbjct: 281 tccacaagatggaaggatctctggaaa 307