Miyakogusa Predicted Gene

Lj0g3v0202099.3
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0202099.3 Non Chatacterized Hit- tr|I1K9S7|I1K9S7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20231 PE,58.16,0,A
Receptor for Ubiquitination Targets,F-box domain, cyclin-like;
seg,NULL; F-box domain,F-box domain,CUFF.12850.3
         (1101 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP071245 similar to UniRef100_A2Q574 Cluster: Cyclin-li...   331   5e-90
gnl|LJGI|BP063614 similar to UniRef100_A2Q574 Cluster: Cyclin-li...   331   5e-90
gnl|LJGI|TC65637 similar to UniRef100_A2Q574 Cluster: Cyclin-lik...   178   5e-44
gnl|LJGI|TC72353 weakly similar to UniRef100_A2Q574 Cluster: Cyc...   167   2e-40
gnl|LJGI|FS344820 weakly similar to UniRef100_A2Q574 Cluster: Cy...   143   3e-33
gnl|LJGI|TC73420 weakly similar to UniRef100_A2Q574 Cluster: Cyc...   131   1e-29
gnl|LJGI|TC61828 similar to UniRef100_A2Q574 Cluster: Cyclin-lik...    86   5e-16
gnl|LJGI|GO023715 weakly similar to UniRef100_A2Q574 Cluster: Cy...    80   3e-14
gnl|LJGI|FS347988 similar to UniRef100_A2Q574 Cluster: Cyclin-li...    60   3e-08
gnl|LJGI|TC75251 weakly similar to UniRef100_A2Q574 Cluster: Cyc...    60   3e-08
gnl|LJGI|BI420296 weakly similar to UniRef100_A2Q574 Cluster: Cy...    54   2e-06

>gnl|LJGI|BP071245 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
           Medicago truncatula|Rep: Cyclin-like F-box - Medicago
           truncatula (Barrel medic), partial (13%)
          Length = 552

 Score =  331 bits (167), Expect = 5e-90
 Identities = 173/175 (98%)
 Strand = Plus / Plus

                                                                       
Query: 35  agagggagagtgaaaatgaagagaacaaagatagacttagtgacttgcctgattgcgttc 94
           |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 353 agagtgagagtgaaaatgaagagaacaaagatagactcagtgacttgcctgattgcgttc 412

                                                                       
Query: 95  tccttcacattctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattatcca 154
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tccttcacattctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattatcca 472

                                                                  
Query: 155 caagatggaaggatctctggaaacgtcttccttccctcatactacattcctcaga 209
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 caagatggaaggatctctggaaacgtcttccttccctcatactacattcctcaga 527


>gnl|LJGI|BP063614 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
           Medicago truncatula|Rep: Cyclin-like F-box - Medicago
           truncatula (Barrel medic), partial (14%)
          Length = 508

 Score =  331 bits (167), Expect = 5e-90
 Identities = 296/339 (87%)
 Strand = Plus / Plus

                                                                       
Query: 45  tgaaaatgaagagaacaaagatagacttagtgacttgcctgattgcgttctccttcacat 104
           |||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 148 tgaaaatgaagataacaaagatagactcagtgacttgcctgattgcattctccttcacat 207

                                                                       
Query: 105 tctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattatccacaagatggaa 164
           ||| ||||||||||| |||||    || ||||||||||||| ||| ||||||||||||||
Sbjct: 208 tctatcatttgtgaaagccaaagccgcggttcaaacttgcatattgtccacaagatggaa 267

                                                                       
Query: 165 ggatctctggaaacgtcttccttccctcatactacattcctcagacttctttacactgaa 224
           |||||||||||||||||||||||||||||||||||  |||||| |||| |  |||   ||
Sbjct: 268 ggatctctggaaacgtcttccttccctcatactactgtcctcaaacttttggacatataa 327

                                                                       
Query: 225 gagctttgccaaatttgtgtctaggcttttgactcttcgcgatggctcaactgcgctcaa 284
           ||||||  ||||||| |||||| ||||||||||||||||||||||||| || |||||  |
Sbjct: 328 gagcttcaccaaattcgtgtctcggcttttgactcttcgcgatggctcgaccgcgctgca 387

                                                                       
Query: 285 gggtcttgattttaaccgttattgtttcattcagcctcacctccttgaaaggattgtaaa 344
            ||||| |||||| | | | || ||  ||||||||||||||||||  |||||||||||||
Sbjct: 388 cggtctagattttgagcatgatggtcacattcagcctcacctcctcaaaaggattgtaaa 447

                                                  
Query: 345 atatgctgtttcacacaatgtccagcaaataggattgtc 383
           |||||||||||||||||||||||| | | ||||||||||
Sbjct: 448 atatgctgtttcacacaatgtccaacgattaggattgtc 486


>gnl|LJGI|TC65637 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
           Medicago truncatula|Rep: Cyclin-like F-box - Medicago
           truncatula (Barrel medic), partial (13%)
          Length = 732

 Score =  178 bits (90), Expect = 5e-44
 Identities = 198/234 (84%)
 Strand = Plus / Plus

                                                                       
Query: 40  gagagtgaaaatgaagagaacaaagatagacttagtgacttgcctgattgcgttctcctt 99
           |||||||| | | ||| |||||| || || |||||||| ||||| ||||||||||| |||
Sbjct: 230 gagagtgagagtaaagtgaacaatgacaggcttagtgatttgcccgattgcgttctgctt 289

                                                                       
Query: 100 cacattctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattatccacaaga 159
           |||||| ||||||||||||| |||| | |||||||||||||||||| |||||||||||||
Sbjct: 290 cacattttgtcatttgtgaaagccaggaatgcagttcaaacttgcatattatccacaaga 349

                                                                       
Query: 160 tggaaggatctctggaaacgtcttccttccctcatactacattcctcagacttctttaca 219
           ||||||||||| |||||| |||||||||| |||||  ||| |||| ||||||| |  |||
Sbjct: 350 tggaaggatctatggaaaagtcttccttcgctcattttactttccccagacttttcgaca 409

                                                                 
Query: 220 ctgaagagctttgccaaatttgtgtctaggcttttgactcttcgcgatggctca 273
            ||||||  ||  ||||||| ||||||| |||||||   ||||| |||||||||
Sbjct: 410 ttgaagattttcaccaaattcgtgtctaagcttttggaacttcgtgatggctca 463


>gnl|LJGI|TC72353 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
            Medicago truncatula|Rep: Cyclin-like F-box - Medicago
            truncatula (Barrel medic), partial (37%)
          Length = 1467

 Score =  167 bits (84), Expect = 2e-40
 Identities = 221/267 (82%), Gaps = 6/267 (2%)
 Strand = Plus / Plus

                                                                        
Query: 706  tcttctccaagccttcgtaccttagcctttaagggtcgtgttttagtgactctcactgga 765
            ||||||||||| ||||||||||| ||||||| |||   |  ||| | |||| ||  ||||
Sbjct: 903  tcttctccaagtcttcgtacctttgcctttacgggcactccttttgagactatctgtgga 962

                                                                        
Query: 766  agaaatctttcttccattgagcatgtaaatttggaaatatggtcgaac------aagtat 819
            |||||| ||||||||||||||||||||||||| || |||   | |||       ||||||
Sbjct: 963  agaaatatttcttccattgagcatgtaaattttgatatacattggaagtgtgaaaagtat 1022

                                                                        
Query: 820  tctttgattctacttagctggctgctagaccttgccaatataaaatcattgacagtctac 879
            ||||| |||||||||||||||||| |||||||| ||||||||||||||||||| || | |
Sbjct: 1023 tcttttattctacttagctggctggtagaccttaccaatataaaatcattgacggtttcc 1082

                                                                        
Query: 880  tcaagtactcttgaggttctctcctccattcctgatatactggagcttaagtatcctatc 939
             ||||||||||| ||||||||  ||| |||||| || |  | |||  |||||||||||||
Sbjct: 1083 acaagtactcttcaggttctcatctcaattcctcatttgttagagtataagtatcctatc 1142

                                       
Query: 940  ttgggtggcttgaagtcattgaaagtt 966
            |||||| ||||||||||||||||||||
Sbjct: 1143 ttgggtagcttgaagtcattgaaagtt 1169



 Score =  105 bits (53), Expect = 6e-22
 Identities = 125/149 (83%)
 Strand = Plus / Plus

                                                                       
Query: 233 ccaaatttgtgtctaggcttttgactcttcgcgatggctcaactgcgctcaagggtcttg 292
           ||||||| |||||| | ||| |||||||||||||| ||||||| |||||  | ||||| |
Sbjct: 406 ccaaattcgtgtctcgccttctgactcttcgcgatcgctcaaccgcgctgcacggtctag 465

                                                                       
Query: 293 attttaaccgttattgtttcattcagcctcacctccttgaaaggattgtaaaatatgctg 352
           ||||| | |||  | |||  |||||||||||||||||  ||||||||||||| ||||| |
Sbjct: 466 attttgagcgtcttggttgtattcagcctcacctcctcaaaaggattgtaaagtatgccg 525

                                        
Query: 353 tttcacacaatgtccagcaaataggattg 381
           ||||||||||||| |||| | ||||||||
Sbjct: 526 tttcacacaatgtgcagcgattaggattg 554



 Score = 65.9 bits (33), Expect = 5e-10
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 473 tatttccagaatctcttaatttgccagcattaactacattgcatctagtgaattttg 529
           |||||||  ||||||||| |||||||||| ||||||| |||||| ||||||||||||
Sbjct: 667 tatttccgaaatctcttagtttgccagcactaactaccttgcatttagtgaattttg 723



 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1017 attttcacttataccttatggaatagtggactttttgcttcaaaactcgccgtccgcgaa 1076
            |||||||  ||||||  |||||| |||||||| ||||||||||||||| || || || ||
Sbjct: 1193 attttcatctataccggatggaacagtggactatttgcttcaaaactcaccctctgccaa 1252

                          
Query: 1077 ggttgacgtcataa 1090
            ||||||| ||||||
Sbjct: 1253 ggttgacatcataa 1266


>gnl|LJGI|FS344820 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
           Medicago truncatula|Rep: Cyclin-like F-box - Medicago
           truncatula (Barrel medic), partial (24%)
          Length = 859

 Score =  143 bits (72), Expect = 3e-33
 Identities = 141/164 (85%)
 Strand = Plus / Plus

                                                                       
Query: 15  gaatccgaagagaggaaggaagagggagagtgaaaatgaagagaacaaagatagacttag 74
           |||| |||||||||||||||| || |||| |||||||||||| |||||||| || || ||
Sbjct: 128 gaatgcgaagagaggaaggaacagtgagaatgaaaatgaagacaacaaagacaggctcag 187

                                                                       
Query: 75  tgacttgcctgattgcgttctccttcacattctgtcatttgtgaatgccaagtatgcagt 134
           |||| | |||||| || |||||||||||||| | |||||| |||||||||| ||||||||
Sbjct: 188 tgaccttcctgatggcattctccttcacattttatcatttatgaatgccaaatatgcagt 247

                                                       
Query: 135 tcaaacttgcacattatccacaagatggaaggatctctggaaac 178
           |||||| || |  |||||  | ||||||||||||||||||||||
Sbjct: 248 tcaaacatgtatcttatcggctagatggaaggatctctggaaac 291



 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 233 ccaaatttgtgtctaggcttttgactcttcgcgatggctcaactgc 278
           |||||||||||||||   ||||||||||||| ||||||||||||||
Sbjct: 337 ccaaatttgtgtctacaattttgactcttcgggatggctcaactgc 382



 Score = 52.0 bits (26), Expect = 7e-06
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 490 aatttgccagcattaactacattgcatctagtgaattt 527
           ||||||||||||||||| || |||||||| ||||||||
Sbjct: 597 aatttgccagcattaaccaccttgcatctggtgaattt 634


>gnl|LJGI|TC73420 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
           Medicago truncatula|Rep: Cyclin-like F-box - Medicago
           truncatula (Barrel medic), partial (23%)
          Length = 714

 Score =  131 bits (66), Expect = 1e-29
 Identities = 126/146 (86%)
 Strand = Plus / Plus

                                                                       
Query: 40  gagagtgaaaatgaagagaacaaagatagacttagtgacttgcctgattgcgttctcctt 99
           |||| ||||| |||||| |||||||| || || |||||||||| ||||||| ||||||||
Sbjct: 174 gagactgaaattgaagacaacaaagacaggctcagtgacttgcatgattgcattctcctt 233

                                                                       
Query: 100 cacattctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattatccacaaga 159
           |||||| |||||||| |||  ||||| || ||||||| ||| ||||  ||||||| ||||
Sbjct: 234 cacattttgtcatttctgagcgccaaatacgcagttcgaacatgcatgttatccaaaaga 293

                                     
Query: 160 tggaaggatctctggaaacgtcttcc 185
           |||||||||||||||||||| |||||
Sbjct: 294 tggaaggatctctggaaacgccttcc 319


>gnl|LJGI|TC61828 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1; Medicago
            truncatula|Rep: Cyclin-like F-box - Medicago truncatula
            (Barrel medic), partial (6%)
          Length = 881

 Score = 85.7 bits (43), Expect = 5e-16
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1027 ataccttatggaatagtggactttttgcttcaaaactcgccgtccgcgaaggttgacgtc 1086
            |||||| ||||| ||||||||||||| |||||||||||||||||||| ||||||||| ||
Sbjct: 520  atacctgatggagtagtggactttttacttcaaaactcgccgtccgctaaggttgacatc 579

               
Query: 1087 ata 1089
            |||
Sbjct: 580  ata 582



 Score = 73.8 bits (37), Expect = 2e-12
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                       
Query: 821 ctttgattctacttagctggctgctagaccttgccaatataaaatcattgacagtctact 880
           |||||||| |||| ||||||||| |||| ||| |||||||||||||||||||||| |   
Sbjct: 245 ctttgattttactgagctggctggtagagcttaccaatataaaatcattgacagtatctg 304

                                
Query: 881 caagtactcttgaggttctct 901
           |||| |||||| |||||||||
Sbjct: 305 caagaactcttcaggttctct 325


>gnl|LJGI|GO023715 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
           Medicago truncatula|Rep: Cyclin-like F-box - Medicago
           truncatula (Barrel medic), partial (14%)
          Length = 555

 Score = 79.8 bits (40), Expect = 3e-14
 Identities = 115/140 (82%)
 Strand = Plus / Plus

                                                                       
Query: 40  gagagtgaaaatgaagagaacaaagatagacttagtgacttgcctgattgcgttctcctt 99
           |||| ||||| |||||||||| |||| || || |||||||| || |||||| | ||||||
Sbjct: 165 gagaatgaaattgaagagaacgaagacaggctaagtgacttacccgattgcatcctcctt 224

                                                                       
Query: 100 cacattctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattatccacaaga 159
           ||| || |||||||| |||| |||     |||||||| ||||  ||  ||||||||||||
Sbjct: 225 cactttttgtcatttctgaacgccggacgtgcagttcgaactaccatgttatccacaaga 284

                               
Query: 160 tggaaggatctctggaaacg 179
           |||||| |||||||||||||
Sbjct: 285 tggaagaatctctggaaacg 304


>gnl|LJGI|FS347988 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1; Medicago
            truncatula|Rep: Cyclin-like F-box - Medicago truncatula
            (Barrel medic), partial (5%)
          Length = 536

 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                          
Query: 1035 tggaatagtggactttttgcttcaaaactc 1064
            ||||||||||||||||||||||||||||||
Sbjct: 461  tggaatagtggactttttgcttcaaaactc 432


>gnl|LJGI|TC75251 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
           Medicago truncatula|Rep: Cyclin-like F-box - Medicago
           truncatula (Barrel medic), partial (14%)
          Length = 718

 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 78/94 (82%)
 Strand = Plus / Plus

                                                                       
Query: 821 ctttgattctacttagctggctgctagaccttgccaatataaaatcattgacagtctact 880
           ||||| ||||||| |||||||||  ||| ||| | ||||| ||||||||||||||||   
Sbjct: 53  ctttggttctactcagctggctggaagagcttactaatatcaaatcattgacagtctcta 112

                                             
Query: 881 caagtactcttgaggttctctcctccattcctga 914
           ||| ||||||| ||||||||| ||  ||||||||
Sbjct: 113 caaatactcttcaggttctcttcttaattcctga 146



 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                          
Query: 1035 tggaatagtggactttttgcttcaaaactc 1064
            ||||||||||||||||||||||||||||||
Sbjct: 351  tggaatagtggactttttgcttcaaaactc 380


>gnl|LJGI|BI420296 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
           Medicago truncatula|Rep: Cyclin-like F-box - Medicago
           truncatula (Barrel medic), partial (15%)
          Length = 592

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 151 tccacaagatggaaggatctctggaaa 177
           |||||||||||||||||||||||||||
Sbjct: 281 tccacaagatggaaggatctctggaaa 307