Miyakogusa Predicted Gene

Lj0g3v0201469.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0201469.1 Non Chatacterized Hit- tr|I1JU86|I1JU86_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39995 PE,44.76,5e-18,
,CUFF.12795.1
         (321 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73842 weakly similar to UniRef100_A7P5Y3 Cluster: Chr...    96   2e-19

>gnl|LJGI|TC73842 weakly similar to UniRef100_A7P5Y3 Cluster: Chromosome chr4
           scaffold_6, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (4%)
          Length = 694

 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 152/186 (81%), Gaps = 3/186 (1%)
 Strand = Plus / Plus

                                                                       
Query: 139 aactcagccttcaatttttgcgatcccttgcaaatgaaccatgatgagatcattgaatta 198
           |||||| ||||||||||| | |||||||| |||||||| ||||||| |||||||||||||
Sbjct: 144 aactcaaccttcaattttggtgatcccttacaaatgaagcatgatgggatcattgaatta 203

                                                                       
Query: 199 actgaagagtgctcaattaaaccacatcagc---tacatgtaatggaccagcagaggtat 255
            ||| ||||  |||| | | |||||||||||   ||||||||||| ||||||||| |  |
Sbjct: 204 cctggagagccctcattgataccacatcagcaggtacatgtaatgaaccagcagaagcct 263

                                                                       
Query: 256 caaaacagtagcatctgtaatagtcttggttcccctgaagacttggacagtgcaatgatg 315
           |   ||||  || |||  |||||| | |||||||  ||||| |||| |||||||||||||
Sbjct: 264 cgtcacagccgcttctcgaatagtgtgggttccctggaagaattggccagtgcaatgatg 323

                 
Query: 316 atgaaa 321
           ||||||
Sbjct: 324 atgaaa 329