Miyakogusa Predicted Gene
- Lj0g3v0201389.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0201389.1 Non Chatacterized Hit- tr|I3SKZ0|I3SKZ0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.76,0,FIBRILLARIN,Fibrillarin; FIBRILLARIN,Fibrillarin,
conserved site; RRNA 2-O-METHYLTRANSFERASE FIBRILL,CUFF.12805.1
(612 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68051 similar to UniRef100_Q25C91 Cluster: Tobacco fi... 932 0.0
gnl|LJGI|TC76348 similar to UniRef100_Q25C91 Cluster: Tobacco fi... 733 0.0
>gnl|LJGI|TC68051 similar to UniRef100_Q25C91 Cluster: Tobacco fibrillarin homolog;
n=1; Nicotiana tabacum|Rep: Tobacco fibrillarin homolog
- Nicotiana tabacum (Common tobacco), partial (98%)
Length = 1194
Score = 932 bits (470), Expect = 0.0
Identities = 470/470 (100%)
Strand = Plus / Plus
Query: 141 cagagttgttgttgagcctcacagacatgagggtattttcattgctaagggtggtaaaga 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 cagagttgttgttgagcctcacagacatgagggtattttcattgctaagggtggtaaaga 339
Query: 201 agatgctcttgttactaagaatctggttcctggtgaagctgtttacaatgagaaaagggt 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 agatgctcttgttactaagaatctggttcctggtgaagctgtttacaatgagaaaagggt 399
Query: 261 tactgttcagaaagaggatggtacaaaagaggaatatagagtttggaatcctttccgctc 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tactgttcagaaagaggatggtacaaaagaggaatatagagtttggaatcctttccgctc 459
Query: 321 caagttggctgctgccatccttggtggggttgacaacatatggattaaacctggagccaa 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 caagttggctgctgccatccttggtggggttgacaacatatggattaaacctggagccaa 519
Query: 381 agtcctttacctaggagctgcttctggaacaactgtttctcatgtgtctgacattgttgg 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 agtcctttacctaggagctgcttctggaacaactgtttctcatgtgtctgacattgttgg 579
Query: 441 tccaaccggagttgtctatgcagtagagttttctcatagaagtgggcgtgatttggtcaa 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tccaaccggagttgtctatgcagtagagttttctcatagaagtgggcgtgatttggtcaa 639
Query: 501 tatggcaaagaagcgtaccaatgttatacctattattgaggacgctagacatccagctaa 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tatggcaaagaagcgtaccaatgttatacctattattgaggacgctagacatccagctaa 699
Query: 561 gtacaggatgttggttgggatggtagatgtggtattttctgatgttgctc 610
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 gtacaggatgttggttgggatggtagatgtggtattttctgatgttgctc 749
Score = 83.8 bits (42), Expect = 1e-15
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 1 atggttcctcctcctagaggtcgtggtggtggtggtggattt 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 atggttcctcctcctagaggtcgtggtggtggtggtggattt 115
>gnl|LJGI|TC76348 similar to UniRef100_Q25C91 Cluster: Tobacco fibrillarin homolog;
n=1; Nicotiana tabacum|Rep: Tobacco fibrillarin homolog
- Nicotiana tabacum (Common tobacco), partial (94%)
Length = 1110
Score = 733 bits (370), Expect = 0.0
Identities = 442/466 (94%)
Strand = Plus / Plus
Query: 145 gttgttgttgagcctcacagacatgagggtattttcattgctaagggtggtaaagaagat 204
||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 223 gttgtggttgagcctcacaggcatgagggtattttcattgccaagggtggtaaagaagat 282
Query: 205 gctcttgttactaagaatctggttcctggtgaagctgtttacaatgagaaaagggttact 264
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 283 gcccttgttactaagaatctggttccgggtgaagctgtttacaatgagaaaagggttact 342
Query: 265 gttcagaaagaggatggtacaaaagaggaatatagagtttggaatcctttccgctccaag 324
|| ||||||||||| |||||||||||||| ||||| |||||||| ||||| |||||||||
Sbjct: 343 gtgcagaaagaggacggtacaaaagaggagtatagggtttggaacccttttcgctccaag 402
Query: 325 ttggctgctgccatccttggtggggttgacaacatatggattaaacctggagccaaagtc 384
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttggctgctgccattcttggtggggttgacaacatatggattaaacctggagccaaagtt 462
Query: 385 ctttacctaggagctgcttctggaacaactgtttctcatgtgtctgacattgttggtcca 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ctttacctaggagctgcttctggaacaactgtttctcatgtgtctgacattgttggtcca 522
Query: 445 accggagttgtctatgcagtagagttttctcatagaagtgggcgtgatttggtcaatatg 504
|| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 523 acaggagttgtctatgcagtagaattttctcatagaagcgggcgtgacttggtcaatatg 582
Query: 505 gcaaagaagcgtaccaatgttatacctattattgaggacgctagacatccagctaagtac 564
||||| |||||||| ||||||||||| |||||||| || |||||||||||||| ||||||
Sbjct: 583 gcaaaaaagcgtactaatgttatacccattattgaagatgctagacatccagccaagtac 642
Query: 565 aggatgttggttgggatggtagatgtggtattttctgatgttgctc 610
|||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 643 aggatgttggttggaatggtagatgtggtattttctgatgttgctc 688