Miyakogusa Predicted Gene

Lj0g3v0200299.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0200299.1 tr|D7LUJ1|D7LUJ1_ARALL Metal ion binding protein
OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_4,33.2,4e-19,seg,NULL; HMA_2,Heavy metal-associated
domain, HMA; HMA,Heavy metal-associated domain, HMA;
CHLOROPL,CUFF.12705.1
         (621 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP035425 weakly similar to UniRef100_A7NZ79 Cluster: Ch...   262   2e-69
gnl|LJGI|TC65499 similar to UniRef100_A7NZ79 Cluster: Chromosome...   157   1e-37

>gnl|LJGI|BP035425 weakly similar to UniRef100_A7NZ79 Cluster: Chromosome chr6
           scaffold_3, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (14%)
          Length = 371

 Score =  262 bits (132), Expect = 2e-69
 Identities = 132/132 (100%)
 Strand = Plus / Minus

                                                                       
Query: 490 acgccatccgtggttctggcaagtgtctccaaggtgaagaatgcacagctgtggccatct 549
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 acgccatccgtggttctggcaagtgtctccaaggtgaagaatgcacagctgtggccatct 312

                                                                       
Query: 550 ccaatatcatcatgtccatcattgccttcacctatcccaacatctagattggtcaacatg 609
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ccaatatcatcatgtccatcattgccttcacctatcccaacatctagattggtcaacatg 252

                       
Query: 610 agttattaatta 621
           ||||||||||||
Sbjct: 251 agttattaatta 240


>gnl|LJGI|TC65499 similar to UniRef100_A7NZ79 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (30%)
          Length = 646

 Score =  157 bits (79), Expect = 1e-37
 Identities = 118/131 (90%)
 Strand = Plus / Plus

                                                                       
Query: 349 gaccaggttgtggttttgagggtgtcattgcactgcaaggcctgtgtagggaaagttagg 408
           |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| 
Sbjct: 178 gaccaggtagtggttttgagggtatcattgcactgcaaggcctgtgtaggaaaagttaga 237

                                                                       
Query: 409 aagcacatttcaaaaatggaaggagtaacatcattcagtatagatatggaggcaaagaaa 468
           ||||| |||||||||||||||||||| ||||||||||  ||||| |||| | ||||||||
Sbjct: 238 aagcatatttcaaaaatggaaggagtgacatcattcaacatagacatggtgacaaagaaa 297

                      
Query: 469 gtaacaatcat 479
           || || |||||
Sbjct: 298 gtgacgatcat 308