Miyakogusa Predicted Gene

Lj0g3v0200239.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0200239.1 tr|G7LAU3|G7LAU3_MEDTR U-box domain-containing
protein OS=Medicago truncatula GN=MTR_8g027140 PE=4
S,77.19,0,Arm,Armadillo; U-box,U box domain; coiled-coil,NULL;
ARM_REPEAT,Armadillo; ARM repeat,Armadillo-type,CUFF.12699.1
         (2961 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW627860 weakly similar to UniRef100_A7QWI0 Cluster: Ch...   946   0.0  

>gnl|LJGI|BW627860 weakly similar to UniRef100_A7QWI0 Cluster: Chromosome undetermined
            scaffold_203, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_203, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (29%)
          Length = 489

 Score =  946 bits (477), Expect = 0.0
 Identities = 477/477 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1010 taaaagaaaaaatccagtccggagatgatgtgctggatgatctgggaactctaaaggagt 1069
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13   taaaagaaaaaatccagtccggagatgatgtgctggatgatctgggaactctaaaggagt 72

                                                                        
Query: 1070 tgtgtgaacaaaaagaccaacacagggaatgggtaatactggagaattacataccagttc 1129
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73   tgtgtgaacaaaaagaccaacacagggaatgggtaatactggagaattacataccagttc 132

                                                                        
Query: 1130 ttatccaaattcttggttcaagaaaccgtgaaataaggaatcttgctcttgccattcttt 1189
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133  ttatccaaattcttggttcaagaaaccgtgaaataaggaatcttgctcttgccattcttt 192

                                                                        
Query: 1190 actcgctggcaaaggataatgaagaagctaaggaaaaaattgcagctgttgataatgcaa 1249
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193  actcgctggcaaaggataatgaagaagctaaggaaaaaattgcagctgttgataatgcaa 252

                                                                        
Query: 1250 ttgaatccattgtcccctcccttggacgtcgtccaggggaaaggaagatagcagtaacat 1309
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253  ttgaatccattgtcccctcccttggacgtcgtccaggggaaaggaagatagcagtaacat 312

                                                                        
Query: 1310 tattgctcgaattgtccaaatgtgatttggcacgagaacacattggaaaagttcaaggtt 1369
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313  tattgctcgaattgtccaaatgtgatttggcacgagaacacattggaaaagttcaaggtt 372

                                                                        
Query: 1370 gcatactgctattggtgactatgtctagcggagatgacaatcaagctgccaaagatgcga 1429
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373  gcatactgctattggtgactatgtctagcggagatgacaatcaagctgccaaagatgcga 432

                                                                     
Query: 1430 cagagctattggagaatctttcttactctgatcaaaatgttatacaaatggcaaagg 1486
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433  cagagctattggagaatctttcttactctgatcaaaatgttatacaaatggcaaagg 489