Miyakogusa Predicted Gene

Lj0g3v0200149.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0200149.1 Non Chatacterized Hit- tr|I1KSP1|I1KSP1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16975
PE,91.3,0,seg,NULL,CUFF.12720.1
         (1725 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60801 similar to UniRef100_A7P092 Cluster: Chromosome...  1378   0.0  
gnl|LJGI|TC72582                                                       54   3e-06

>gnl|LJGI|TC60801 similar to UniRef100_A7P092 Cluster: Chromosome chr6 scaffold_3,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_3, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (9%)
          Length = 773

 Score = 1378 bits (695), Expect = 0.0
 Identities = 754/771 (97%), Gaps = 2/771 (0%)
 Strand = Plus / Plus

                                                                        
Query: 834  aagtctgaaacgaagtagtagtgttgaagccggtaatcttggaaatggcactgaaactgc 893
            |||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 2    aagtatgaaacgaagtagtagtgttgaagccagtaatcttggaaatggtactgaaactgc 61

                                                                        
Query: 894  caggggtatgactgcaggtgatgggagcaattggaacaatgccatgtctcaaactgctaa 953
            ||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 62   caggggtatgactgcagctgatgggagcaattggaacaatgtcctgtctcaaactgctaa 121

                                                                        
Query: 954  cttgcctgatggaataaatagtgataaaagcatagatagtggaagatcaagtttggcatt 1013
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| 
Sbjct: 122  cttgcctgatggaataaatagtgataaaagcatagatagtgggagatcaagtttggcata 181

                                                                        
Query: 1014 acatagcagctcctgtcgctcagctgttcatgagccagaagtggcaacatcatctaatga 1073
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 182  acatagcagctcctgtcgctcagctgttcatgagccagaagtggcagcatcatctaatga 241

                                                                        
Query: 1074 tagaaatttggatcacaataattccttggtggtttgttccagtagtggcattgatagtca 1133
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242  tagaaatttggatcacaataattccttggtggtttgttccagtagtggcattgatagtca 301

                                                                        
Query: 1134 agggaatgactccagtgcatcaaactccgcaaatcaacaaacattggattttaatttggc 1193
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302  agggaatgactctagtgcatcaaactccgcaaatcaacaaacattggattttaatttggc 361

                                                                        
Query: 1194 tcttgcattccaagaaaggttgaaagaccctaagattgcaactatgctgaaaagaagaac 1253
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362  tcttgcattccaagaaaggttgaaagaccctaagattgcaactatgctgaaaagaagaac 421

                                                                        
Query: 1254 aagacatggtgatatagaactgagtagtttattacaagataaaggcttggatccaaattt 1313
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422  aagacatggtgatatagaactgagtagtttattacaagataaaggcttggatccaaattt 481

                                                                        
Query: 1314 tgcaatgatgttaaaagagaaaagtttggaattagatccaactatcctggcattattgca 1373
            ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 482  tgcaatggtgttaaaagagaaaagtttggaattagatccaactatccgggcattattgca 541

                                                                        
Query: 1374 gaggagtagtctggatgcagatagagatcatcaacaaaatactgataatacaagtgttga 1433
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542  gaggagtagtctggatgcagatagagatcatcaacaaaatactgataatacaagtgttga 601

                                                                        
Query: 1434 taatgccatacctcatcaaatttcattatctgaagaactgaggctacatggacttgaaaa 1493
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 602  taatgccatacctcatcaaatttcattatctgaagaactgaggctacatggacttgaaag 661

                                                                        
Query: 1494 gtggcttcagttgtgtagacttgtattgcaccacataacgggtactccagaacgagcatg 1553
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 662  gtggcttcagttgtgtagacttctattgcaccacataacgggtactccagaacgagcatg 721

                                                               
Query: 1554 ggttctgtttagtttcattttcgtacttgaaaccgtcactgttgctatatt 1604
            ||||||||||||||||| ||||||||||| ||| |||||||||||||||||
Sbjct: 722  ggttctgtttagtttca-tttcgtacttg-aactgtcactgttgctatatt 770


>gnl|LJGI|TC72582 
          Length = 470

 Score = 54.0 bits (27), Expect = 3e-06
 Identities = 58/67 (86%), Gaps = 1/67 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1462 tctgaagaactgaggctacatggacttgaaaagtggcttcagttgtgtagacttgtattg 1521
            |||||||||||||||||  ||||||||| |||||||||| | || || ||||||||| ||
Sbjct: 181  tctgaagaactgaggctcaatggacttg-aaagtggctttaattatgcagacttgtactg 239

                   
Query: 1522 caccaca 1528
            || ||||
Sbjct: 240  catcaca 246