Miyakogusa Predicted Gene

Lj0g3v0199939.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0199939.1 Non Chatacterized Hit- tr|I1KAP0|I1KAP0_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,29.45,0.0000002,SUBFAMILY NOT NAMED,NULL; TOPOISOMERASE-RELATED
PROTEIN,NULL; seg,NULL,CUFF.12694.1
         (483 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS318086 similar to UniRef100_A7PZU6 Cluster: Chromosom...   930   0.0  

>gnl|LJGI|FS318086 similar to UniRef100_A7PZU6 Cluster: Chromosome chr15 scaffold_40,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_40, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 758

 Score =  930 bits (469), Expect = 0.0
 Identities = 480/483 (99%), Gaps = 3/483 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacacgagcagctattgagtcatcagagcacaaggctgacattcttaatagtgacttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 atgacacgagcagctattgagtcatcagagcacaaggctgacattcttaatagtgacttt 222

                                                                       
Query: 61  gttagccactggcaaaatttgcaatttgggcgattctgtcaaacctcacgtcatccacct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gttagccactggcaaaatttgcaatttgggcgattctgtcaaacctcacgtcatccacct 282

                                                                       
Query: 121 tcaatgatgtatccttcacctgttatggtacctcctgcttatttgcagggtcgttatcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tcaatgatgtatccttcacctgttatggtacctcctgcttatttgcagggtcgttatcct 342

                                                                       
Query: 181 ttggatggtccgggaagacctgacatgaatctttttgcccagcttatgagctatgggcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ttggatggtccgggaagacctgacatgaatctttttgcccagcttatgagctatgggcca 402

                                                                       
Query: 241 cgagtagttcctgcggctcctctccagtcagtttcgactagacctacaaatatgtaccaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cgagtagttcctgcggctcctctccagtcagtttcgactagacctacaaatatgtaccaa 462

                                                                       
Query: 301 cggtttgctgatgatatgcctcggtatcgaagtgggactggaacctacctgccaaatcct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 cggtttgctgatgatatgcctcggtatcgaagtgggactggaacctacctgccaaatcct 522

                                                                       
Query: 361 aaggcttctgctcgggatcgacatcccacaaataacagaagggcaaattacaactatgac 420
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ---gcttctgctcgggatcgacatcccacaaataacagaagggcaaattacaactatgac 579

                                                                       
Query: 421 agaaatgaccatcacagtgatagagaaggaaattggaacatgaacccaaagttgcgagca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 agaaatgaccatcacagtgatagagaaggaaattggaacatgaacccaaagttgcgagca 639

              
Query: 481 act 483
           |||
Sbjct: 640 act 642