Miyakogusa Predicted Gene
- Lj0g3v0199689.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0199689.1 Non Chatacterized Hit- tr|B4FQZ1|B4FQZ1_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,26.84,0.00000000003,zf-met,NULL; U1-like zinc finger,Zinc finger,
U1-type; zinc finger,Zinc finger, C2H2-like; seg,NULL;,CUFF.12654.1
(1551 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58987 weakly similar to UniRef100_A7QY77 Cluster: Chr... 1402 0.0
gnl|LJGI|TC68440 weakly similar to UniRef100_Q2ADG2 Cluster: Ppi... 898 0.0
gnl|LJGI|FS362397 similar to UniRef100_A1FNV0 Cluster: Two compo... 571 e-162
gnl|LJGI|FS328849 507 e-143
>gnl|LJGI|TC58987 weakly similar to UniRef100_A7QY77 Cluster: Chromosome chr2
scaffold_241, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_241, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 849
Score = 1402 bits (707), Expect = 0.0
Identities = 707/707 (100%)
Strand = Plus / Plus
Query: 45 acaacagccacattcctatgaattgcagtacgacccatctcaggttcaaccctacgaccc 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 acaacagccacattcctatgaattgcagtacgacccatctcaggttcaaccctacgaccc 202
Query: 105 atctcagattcaaccctacgaccaatcctacgcatatcaacaaccctattacgcctacaa 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 atctcagattcaaccctacgaccaatcctacgcatatcaacaaccctattacgcctacaa 262
Query: 165 tcaccaatacccatatgtcgctgatacccatcaaccccatcaccttcaattccagcctga 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tcaccaatacccatatgtcgctgatacccatcaaccccatcaccttcaattccagcctga 322
Query: 225 accctctccggttcacccccctggtgtcatcccagccgctgctgaaccgggtctcgccag 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 accctctccggttcacccccctggtgtcatcccagccgctgctgaaccgggtctcgccag 382
Query: 285 acctagccatggctcggccgggccatctcaatatagaggtaggggtggcaggggtggtag 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 acctagccatggctcggccgggccatctcaatatagaggtaggggtggcaggggtggtag 442
Query: 345 accatttagacggggtggccgtggtcgtggtcgaggccagttcaatcatggtaggggaca 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 accatttagacggggtggccgtggtcgtggtcgaggccagttcaatcatggtaggggaca 502
Query: 405 tggggtgggtggtggtggacactttccatcccatacttcaggacctgctatttctgatgt 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tggggtgggtggtggtggacactttccatcccatacttcaggacctgctatttctgatgt 562
Query: 465 gccaggtgcacctgctgctgctggagcaacctcatcaatctctgggcaaatgacaatacc 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gccaggtgcacctgctgctgctggagcaacctcatcaatctctgggcaaatgacaatacc 622
Query: 525 taattcagctgaagtgccagctgcatctgctcaacctctatcacgtaagatgtattgtga 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 taattcagctgaagtgccagctgcatctgctcaacctctatcacgtaagatgtattgtga 682
Query: 585 agtttgtaaggctgagtgcaacagtccagaaatcatggaacaacataagaatggaaagag 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 agtttgtaaggctgagtgcaacagtccagaaatcatggaacaacataagaatggaaagag 742
Query: 645 acataagaagaatatgaaaatacatgaagaattacagagacgcaataatttaaatggaca 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 acataagaagaatatgaaaatacatgaagaattacagagacgcaataatttaaatggaca 802
Query: 705 acagagtggacagattcctacatctcaagtgaatttggcagatcatc 751
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 acagagtggacagattcctacatctcaagtgaatttggcagatcatc 849
>gnl|LJGI|TC68440 weakly similar to UniRef100_Q2ADG2 Cluster: PpiC-type peptidyl-prolyl
cis-trans isomerase precursor; n=1; Halothermothrix
orenii H 168|Rep: PpiC-type peptidyl-prolyl cis-trans
isomerase precursor - Halothermothrix orenii H 168,
partial (6%)
Length = 888
Score = 898 bits (453), Expect = 0.0
Identities = 460/461 (99%), Gaps = 1/461 (0%)
Strand = Plus / Plus
Query: 1091 agcacttagcaaatctgaagcgagcaaatggttcccaagctttgcctggagcaggtaaac 1150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agcacttagcaaatctgaagcgagcaaatggttcccaagctttgcctggagcaggtaaac 61
Query: 1151 aaacttcatccacagtagttcatcaacctttgcctggagtatcaggtcttcaagcactat 1210
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 62 aaacttcatccacagtagttcatcaacctttgcctggagtatcaggtctt-aagcactat 120
Query: 1211 acccatccgacgtcaacgctctggcgaatgcaattaatactcaagtccaacaaggtgata 1270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acccatccgacgtcaacgctctggcgaatgcaattaatactcaagtccaacaaggtgata 180
Query: 1271 atgatccacagatacttttggctcagcttctgatgactgtgatatctcaaggacaagggc 1330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgatccacagatacttttggctcagcttctgatgactgtgatatctcaaggacaagggc 240
Query: 1331 aagcaccagcaattccacccacaggacctttggctggtcagataccagagccctcatcag 1390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagcaccagcaattccacccacaggacctttggctggtcagataccagagccctcatcag 300
Query: 1391 tgcccggattaagtcatgaacaacaattggcacagacacaagtgtcagacataacagcac 1450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgcccggattaagtcatgaacaacaattggcacagacacaagtgtcagacataacagcac 360
Query: 1451 atgttgagatggaaaatcctgctggggaaacaaataatgaactgttatctgaacaacaat 1510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgttgagatggaaaatcctgctggggaaacaaataatgaactgttatctgaacaacaat 420
Query: 1511 tggcacagacacaagtgtcggacataacagcacatgttgag 1551
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggcacagacacaagtgtcggacataacagcacatgttgag 461
Score = 172 bits (87), Expect = 4e-42
Identities = 93/95 (97%)
Strand = Plus / Plus
Query: 1407 tgaacaacaattggcacagacacaagtgtcagacataacagcacatgttgagatggaaaa 1466
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 410 tgaacaacaattggcacagacacaagtgtcggacataacagcacatgttgagatggaaaa 469
Query: 1467 tcctgctggggaaacaaataatgaactgttatctg 1501
|||||||||||||||||||| ||||||||||||||
Sbjct: 470 tcctgctggggaaacaaatagtgaactgttatctg 504
>gnl|LJGI|FS362397 similar to UniRef100_A1FNV0 Cluster: Two component transcriptional
regulator, LuxR family; n=1; Pseudomonas putida W619|Rep:
Two component transcriptional regulator, LuxR family -
Pseudomonas putida W619, partial (7%)
Length = 684
Score = 571 bits (288), Expect = e-162
Identities = 294/296 (99%)
Strand = Plus / Minus
Query: 1255 gtccaacaaggtgataatgatccacagatacttttggctcagcttctgatgactgtgata 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gtccaacaaggtgataatgatccacagatacttttggctcagcttctgatgactgtgata 625
Query: 1315 tctcaaggacaagggcaagcaccagcaattccacccacaggacctttggctggtcagata 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tctcaaggacaagggcaagcaccagcaattccacccacaggacctttggctggtcagata 565
Query: 1375 ccagagccctcatcagtgcccggattaagtcatgaacaacaattggcacagacacaagtg 1434
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 564 ccagagccctcatcagtgcccggattaagtcatgaacaacaattggcacaaacacaagtg 505
Query: 1435 tcagacataacagcacatgttgagatggaaaatcctgctggggaaacaaataatgaactg 1494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcagacataacagcacatgttgagatggaaaatcctgctggggaaacaaataatgaactg 445
Query: 1495 ttatctgaacaacaattggcacagacacaagtgtcggacataacagcacatgttga 1550
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttatttgaacaacaattggcacagacacaagtgtcggacataacagcacatgttga 389
Score = 165 bits (83), Expect = 1e-39
Identities = 92/95 (96%)
Strand = Plus / Minus
Query: 1407 tgaacaacaattggcacagacacaagtgtcagacataacagcacatgttgagatggaaaa 1466
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 439 tgaacaacaattggcacagacacaagtgtcggacataacagcacatgttgaaatggaaaa 380
Query: 1467 tcctgctggggaaacaaataatgaactgttatctg 1501
|||||||||||||||||||| ||||||||||||||
Sbjct: 379 tcctgctggggaaacaaatagtgaactgttatctg 345
Score = 87.7 bits (44), Expect = 2e-16
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 1500 tgaacaacaattggcacagacacaagtgtcggacataacagcacatgttgag 1551
|||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 532 tgaacaacaattggcacaaacacaagtgtcagacataacagcacatgttgag 481
>gnl|LJGI|FS328849
Length = 729
Score = 507 bits (256), Expect = e-143
Identities = 256/256 (100%)
Strand = Plus / Plus
Query: 45 acaacagccacattcctatgaattgcagtacgacccatctcaggttcaaccctacgaccc 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 acaacagccacattcctatgaattgcagtacgacccatctcaggttcaaccctacgaccc 205
Query: 105 atctcagattcaaccctacgaccaatcctacgcatatcaacaaccctattacgcctacaa 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 atctcagattcaaccctacgaccaatcctacgcatatcaacaaccctattacgcctacaa 265
Query: 165 tcaccaatacccatatgtcgctgatacccatcaaccccatcaccttcaattccagcctga 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tcaccaatacccatatgtcgctgatacccatcaaccccatcaccttcaattccagcctga 325
Query: 225 accctctccggttcacccccctggtgtcatcccagccgctgctgaaccgggtctcgccag 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 accctctccggttcacccccctggtgtcatcccagccgctgctgaaccgggtctcgccag 385
Query: 285 acctagccatggctcg 300
||||||||||||||||
Sbjct: 386 acctagccatggctcg 401