Miyakogusa Predicted Gene

Lj0g3v0199269.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0199269.1 Non Chatacterized Hit- tr|C6T2R6|C6T2R6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.31767
PE,86.49,0,seg,NULL; SAP18,Sin3 associated polypeptide
p18,CUFF.12625.1
         (462 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60114 similar to UniRef100_O64644 Cluster: Histone de...   908   0.0  

>gnl|LJGI|TC60114 similar to UniRef100_O64644 Cluster: Histone deacetylase complex
           subunit SAP18; n=1; Arabidopsis thaliana|Rep: Histone
           deacetylase complex subunit SAP18 - Arabidopsis thaliana
           (Mouse-ear cress), partial (93%)
          Length = 765

 Score =  908 bits (458), Expect = 0.0
 Identities = 461/462 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagcgaggccgcagcaaaacgacaaggtgggaggccgttgcctccgcctccaagaggc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  atgagcgaggccgcagcaaaacgacaaggtgggaggccgttgcctccgcctccaagaggc 124

                                                                       
Query: 61  cctcctccccatgcttcacgacctcgccccgaccccgtcgatcgcgaaaagacatgccct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 cctcctccccatgcttcacgacctcgccccgaccccgtcgatcgcgaaaagacatgccct 184

                                                                       
Query: 121 ttgttgctccgagtcttcactaagattggaggtcatcatacaatggaagatttcgctgtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ttgttgctccgagtcttcactaagattggaggtcatcatacaatggaagatttcgctgtc 244

                                                                       
Query: 181 agagggaaagagcccaaggacgaggttcagatttatacctggaaggacgctactctcaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 agagggaaagagcccaaggacgaggttcagatttatacctggaaggacgctactctcaga 304

                                                                       
Query: 241 gagttaactgatctcgtcaaagaagtggctccagctgcaagaaggagaaaagcaaagctt 300
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 305 gagttaactgatctcgtcaaagaagtggctccagctgcaagaaggagaaatgcaaagctt 364

                                                                       
Query: 301 tcatttgcctttgtgtttcctgataaaaatggccgtttcaaagttcaagaggtgggcaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tcatttgcctttgtgtttcctgataaaaatggccgtttcaaagttcaagaggtgggcaag 424

                                                                       
Query: 361 acattatcgtttggtactggtagattagatgatggcaaggctttagctgaccttggtttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 acattatcgtttggtactggtagattagatgatggcaaggctttagctgaccttggtttt 484

                                                     
Query: 421 gagattggtgattacttggatgtgtctattattgtgtaggtt 462
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gagattggtgattacttggatgtgtctattattgtgtaggtt 526