Miyakogusa Predicted Gene

Lj0g3v0199219.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0199219.1 CUFF.12618.1
         (388 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73361                                                      299   7e-81

>gnl|LJGI|TC73361 
          Length = 1129

 Score =  299 bits (151), Expect = 7e-81
 Identities = 230/258 (89%), Gaps = 20/258 (7%)
 Strand = Plus / Minus

                                                                        
Query: 11   ggtgctacaaacccagtttaattggaaaaagaggtacaggaaaagaaa--aaatgc-aca 67
            ||||||||||||||||| |||  ||||||||||||||||||||||| |  |||||| |||
Sbjct: 1109 ggtgctacaaacccagtgtaaaaggaaaaagaggtacaggaaaagagacgaaatgcgaca 1050

                                                                        
Query: 68   cacggcatggcacaaatagtctcagccttactgttgcagaaaccagcaaatcatccttcc 127
            || |||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 1049 cagggcatggcacaaatagtctcagccttacggtagcagaaaccagcaaatcatccttcc 990

                                                                        
Query: 128  atgttcatcaagctcttcaccattttcataaaatcaactcctcaaacccagaaacaataa 187
            ||||||||||||||||||||||||| ||||||||||||||||||||||||          
Sbjct: 989  atgttcatcaagctcttcaccatttacataaaatcaactcctcaaaccca---------- 940

                                                                        
Query: 188  aaccccagaaaataaaccctcaaaagtcatatacttcatcattttcatcttcatcatcta 247
                   |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939  -------gaaaataaaccctcaaaagtcatatacttcatcattttcatcttcatcatcta 887

                              
Query: 248  cctatagaaaccatattt 265
            ||||||||||||||||||
Sbjct: 886  cctatagaaaccatattt 869



 Score = 83.8 bits (42), Expect = 7e-16
 Identities = 45/46 (97%)
 Strand = Plus / Minus

                                                         
Query: 343 gaagtccaacagagagagacgagatcgagagcagggaagtcatgat 388
           ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 791 gaagtccaacagagagagaagagatcgagagcagggaagtcatgat 746