Miyakogusa Predicted Gene
- Lj0g3v0198449.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0198449.1 Non Chatacterized Hit- tr|I1J047|I1J047_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,34.1,2e-18,ATG13,Autophagy-related protein 13;
seg,NULL,NODE_35703_length_2258_cov_32.995571.path3.1
(1635 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS322586 similar to UniRef100_Q53PN1 Cluster: Expressed... 1017 0.0
gnl|LJGI|FS349171 similar to UniRef100_Q1NRY9 Cluster: Chemotaxi... 448 e-125
gnl|LJGI|BP080241 similar to UniRef100_Q9LSA0 Cluster: Emb|CAB62... 96 8e-19
>gnl|LJGI|FS322586 similar to UniRef100_Q53PN1 Cluster: Expressed protein; n=1; Oryza
sativa Japonica Group|Rep: Expressed protein - Oryza
sativa subsp. japonica (Rice), partial (14%)
Length = 679
Score = 1017 bits (513), Expect = 0.0
Identities = 516/517 (99%)
Strand = Plus / Plus
Query: 1 atggtacctcaacctcatgggagtgcacactctgatgcggcgaagacggaacagataatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 atggtacctcaacctcatgggagtgcacactctgatgcggcgaagacggaacagataatc 222
Query: 61 actgagttctttgcgaagagtcttcacataatacttgaatctagggcggtttacgcgtcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 actgagttctttgcgaagagtcttcacataatacttgaatctagggcggtttacgcgtcg 282
Query: 121 tcgcgcaactcgtgtgctgatcaagcagtgttgtcgtctccgtgttcatcggcttcatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tcgcgcaactcgtgtgctgatcaagcagtgttgtcgtctccgtgttcatcggcttcatcc 342
Query: 181 tcctcatcgagcgtgcggccgagggataaatggttcaatttggcgctccgggaatgccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tcctcatcgagcgtgcggccgagggataaatggttcaatttggcgctccgggaatgccct 402
Query: 241 agtgtgttggagaatgttgacctcgggcgccggaataatcttgagtgtgtggtgattgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 agtgtgttggagaatgttgacctcgggcgccggaataatcttgagtgtgtggtgattgat 462
Query: 301 gtgattttggtgcagagggctttggactgcgaccccgtgacctcgagcttttctccgaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gtgattttggtgcagagggctttggactgcgaccccgtgacctcgagcttttctccgaaa 522
Query: 361 agggttcttcctaggagttctttactcaaagaacggtatccgctttgctgtaatgctggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 agggttcttcctaggagttctttactcaaagaacggtatccgctttgctgtaatgctggt 582
Query: 421 cgagaagaatttgggattgaggcaaagagtgaaaagattgtggagagatgggtgatacaa 480
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 583 cgagaagaatttgggattgaggcaaagagtgaaaagattgtagagagatgggtgatacaa 642
Query: 481 tatgagagtaggaagacaagggattctaattctggaa 517
|||||||||||||||||||||||||||||||||||||
Sbjct: 643 tatgagagtaggaagacaagggattctaattctggaa 679
>gnl|LJGI|FS349171 similar to UniRef100_Q1NRY9 Cluster: Chemotaxis sensory transducer;
n=1; delta proteobacterium MLMS-1|Rep: Chemotaxis sensory
transducer - delta proteobacterium MLMS-1, partial (5%)
Length = 585
Score = 448 bits (226), Expect = e-125
Identities = 268/289 (92%)
Strand = Plus / Minus
Query: 1347 tcaccaaactgctactcctaattcaagagttagcgtcacaactacgccagtgaagttagc 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tcaccaaactgctactcctaattcaagagttagcgtcacaactacgccagtgaagttagc 526
Query: 1407 caatcaacaaccnnnnnnngaacactcgtcacacggcagccgcgaaaccttaaacagcaa 1466
|||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 caatcaacaaccaaaaaaagaacactcgtcacacggcagccgcgaaaccttaaacagcaa 466
Query: 1467 tactctagagcccaatcaaatcctagaggaaccaagaccagtgagtataaagtctactgg 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tactctagagcccaatcaaatcctagaggaaccaagaccagtgagtataaagtctactgg 406
Query: 1527 gataacagcaactaggaaaacagcaagtgatgcattggaagagttccatggttacnnnnn 1586
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gataacagcaactaggaaaacagcaagtgatgcattggaagagttccatggttacaaaaa 346
Query: 1587 nnnnnnnnncttgttactcaagcaaggtagtatgcctcaactatagtac 1635
||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 aatgaaaaacttgttactcaagcaaggtagtatgcctcaactatagtac 297
>gnl|LJGI|BP080241 similar to UniRef100_Q9LSA0 Cluster: Emb|CAB62463.1; n=2; Arabidopsis
thaliana|Rep: Emb|CAB62463.1 - Arabidopsis thaliana
(Mouse-ear cress), partial (7%)
Length = 442
Score = 95.6 bits (48), Expect = 8e-19
Identities = 87/100 (87%)
Strand = Plus / Minus
Query: 1214 aagctggaggattctttcctatcagaaagtcacatgatgctgctgtcggtgcgcttgtac 1273
|||||||| |||| |||||||||||||||| || |||||||| || ||||| |||||||
Sbjct: 440 aagctggaaaattccttcctatcagaaagtcccaagatgctgcagttggtgcacttgtac 381
Query: 1274 atatgctgaagaaagcaccacctctccatcaagatttctc 1313
||||| |||||||||| ||||||| |||||||| |||||
Sbjct: 380 atatgttgaagaaagcggcacctctgcatcaagacttctc 341