Miyakogusa Predicted Gene

Lj0g3v0197659.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0197659.1 Non Chatacterized Hit- tr|C4V790|C4V790_NOSCE
Putative uncharacterized protein OS=Nosema ceranae (st,35.56,5,
,NODE_115249_length_792_cov_28.113636.path1.1
         (246 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP040784 weakly similar to UniRef100_Q7AKG0 Cluster: Ch...   430   e-120
gnl|LJGI|TC76888                                                      105   1e-22

>gnl|LJGI|BP040784 weakly similar to UniRef100_Q7AKG0 Cluster: Chitinase two-component
           sensor kinase; n=2; Streptomyces coelicolor|Rep:
           Chitinase two-component sensor kinase - Streptomyces
           coelicolor, partial (6%)
          Length = 521

 Score =  430 bits (217), Expect = e-120
 Identities = 231/238 (97%)
 Strand = Plus / Plus

                                                                       
Query: 9   gtccagacaagacttgaaaacaatatctgagtcagtctcagccacactaacagtgtattt 68
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtccagacaagacttgaaaacaatatctgagtcagtctcagccacactaacagtgtattt 60

                                                                       
Query: 69  ggaaacacagtggtcgcgcaagtcactaaagttgaagctacaaatagtagctttcaaaag 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggaaacacagtggtcgcgcaagtcactaaagttgaagctacaaatagtagctttcaaaag 120

                                                                       
Query: 129 cgcaattctacatggtaaatccacagaaccnnnnnnncaaacaatgaaacactgcatcaa 188
           ||||||||||||||||||||||||||||||       |||||||||||||||||||||||
Sbjct: 121 cgcaattctacatggtaaatccacagaaccaaaaaaacaaacaatgaaacactgcatcaa 180

                                                                     
Query: 189 atatggttttcctgtacaggccttttgctgtccctctcagcatgtcccagcaggttga 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atatggttttcctgtacaggccttttgctgtccctctcagcatgtcccagcaggttga 238


>gnl|LJGI|TC76888 
          Length = 497

 Score =  105 bits (53), Expect = 1e-22
 Identities = 203/249 (81%), Gaps = 15/249 (6%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgtgtatgtccagacaagacttgaaaacaatatctgagtcagtctcagccacactaaca 60
           ||||||||  ||||||||||||||||||||||    ||| ||| ||| ||||||||||||
Sbjct: 435 atgtgtatacccagacaagacttgaaaacaat----gagacaggctcggccacactaaca 380

                                                                       
Query: 61  gtgtatttggaaacacagtgg--tcgcgcaagtcac-taaagttgaagctacaaatagta 117
           ||||||||||||||  ||||   || ||||||  || |||||||||||||||||||||||
Sbjct: 379 gtgtatttggaaact-agtgcaatcacgcaagcgacgtaaagttgaagctacaaatagta 321

                                                                       
Query: 118 gctttcaaaagcgcaattctacatggtaaatccacagaaccnnnnnnncaaacaatgaaa 177
           ||||| |  | ||| |||| | ||||||||| |||| ||          | ||| | |||
Sbjct: 320 gctttaagta-cgcgattcaagatggtaaatgcacataa------ttaaacacactaaaa 268

                                                                       
Query: 178 cactgcatcaaatatggttttcctgtacaggccttttgctgtccctctcagcatgtccca 237
           ||||||||||||   |||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 267 cactgcatcaaactgggttttcctgtatatgccttttgctgtccctctcagcatgtccca 208

                    
Query: 238 gcaggttga 246
           || ||||||
Sbjct: 207 gccggttga 199