Miyakogusa Predicted Gene

Lj0g3v0197519.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0197519.1 Non Chatacterized Hit- tr|F6GU18|F6GU18_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,63.18,0,ZINC
FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN,NULL; CALCIUM-ACTIVATED
CHLORIDE CHANNEL REGULAT,CUFF.12509.1
         (777 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO026249 similar to UniRef100_A7NZL5 Cluster: Chromosom...   545   e-154
gnl|LJGI|AV768859                                                     109   3e-23
gnl|LJGI|TC78771 similar to UniRef100_A7NZL5 Cluster: Chromosome...    64   1e-09

>gnl|LJGI|GO026249 similar to UniRef100_A7NZL5 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (11%)
          Length = 275

 Score =  545 bits (275), Expect = e-154
 Identities = 275/275 (100%)
 Strand = Plus / Plus

                                                                       
Query: 392 ttaaagctgagcgcggcgactttgttgctgcagtttctaccttggagagttgtcaaaggg 451
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttaaagctgagcgcggcgactttgttgctgcagtttctaccttggagagttgtcaaaggg 60

                                                                       
Query: 452 cactgtctgaaactgtttcggcccgagctggtgatagcttatgtgtttctttgtctgctg 511
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cactgtctgaaactgtttcggcccgagctggtgatagcttatgtgtttctttgtctgctg 120

                                                                       
Query: 512 aactgaaggagatgcaagagaggatggaaaaccggcgaatttatgaacagtctggaagag 571
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aactgaaggagatgcaagagaggatggaaaaccggcgaatttatgaacagtctggaagag 180

                                                                       
Query: 572 cttatcttctatcaggaattagctctcattcatctcaaagagcaactacacgaggtgatt 631
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttatcttctatcaggaattagctctcattcatctcaaagagcaactacacgaggtgatt 240

                                              
Query: 632 ccacagacaccaccagatcataccaaaccgcttcc 666
           |||||||||||||||||||||||||||||||||||
Sbjct: 241 ccacagacaccaccagatcataccaaaccgcttcc 275


>gnl|LJGI|AV768859 
          Length = 173

 Score =  109 bits (55), Expect = 3e-23
 Identities = 55/55 (100%)
 Strand = Plus / Minus

                                                                  
Query: 723 aaatagcctccctccttctaaatccttcaatgaccggctgggaagaaagaaataa 777
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 aaatagcctccctccttctaaatccttcaatgaccggctgggaagaaagaaataa 119


>gnl|LJGI|TC78771 similar to UniRef100_A7NZL5 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 1035

 Score = 63.9 bits (32), Expect = 1e-09
 Identities = 71/84 (84%)
 Strand = Plus / Plus

                                                                       
Query: 455 tgtctgaaactgtttcggcccgagctggtgatagcttatgtgtttctttgtctgctgaac 514
           |||||||||||||||| |||| ||| || ||| | ||||||||| |  | || |||||| 
Sbjct: 194 tgtctgaaactgtttctgcccaagccggggatcggttatgtgttgcgctttcggctgaat 253

                                   
Query: 515 tgaaggagatgcaagagaggatgg 538
           | ||||||||||||||||||||||
Sbjct: 254 taaaggagatgcaagagaggatgg 277



 Score = 52.0 bits (26), Expect = 5e-06
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 276 aactagtgaagtgaaaattcagagacctga 305
           |||||||||||| |||||||||||||||||
Sbjct: 15  aactagtgaagtaaaaattcagagacctga 44