Miyakogusa Predicted Gene
- Lj0g3v0197349.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0197349.1 tr|I3T518|I3T518_LOTJA Proteasome subunit alpha
type OS=Lotus japonicus PE=2 SV=1,98.17,0,PROTEASOME SUBUNIT ALPHA
TYPE 6,NULL; PROTEASOME SUBUNIT ALPHA/BETA,NULL; no description,NULL;
PROTE,CUFF.12542.1
(495 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59391 homologue to UniRef100_O48551 Cluster: Proteaso... 981 0.0
gnl|LJGI|TC80997 homologue to UniRef100_Q9XG77 Cluster: Proteaso... 208 2e-53
>gnl|LJGI|TC59391 homologue to UniRef100_O48551 Cluster: Proteasome subunit alpha
type-6; n=1; Glycine max|Rep: Proteasome subunit alpha
type-6 - Glycine max (Soybean), complete
Length = 1241
Score = 981 bits (495), Expect = 0.0
Identities = 495/495 (100%)
Strand = Plus / Plus
Query: 1 atgacagctgatgctaggacactggttcaacaagcaagaaatgaagcagctgaatttcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 atgacagctgatgctaggacactggttcaacaagcaagaaatgaagcagctgaatttcgg 447
Query: 61 cacacatatggatatgagatgcctgtggacgtattagctaaatggattgctgataaatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cacacatatggatatgagatgcctgtggacgtattagctaaatggattgctgataaatca 507
Query: 121 caagtctatactcagcatgcttatatgagacctcttggagtagttgctatggttttgggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 caagtctatactcagcatgcttatatgagacctcttggagtagttgctatggttttgggt 567
Query: 181 attgatgacgaaaatggggctcagctttacaaatgcgatcctgctggccattactttggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 attgatgacgaaaatggggctcagctttacaaatgcgatcctgctggccattactttggt 627
Query: 241 cacaaggccacaagtgctggattgaaggaccaagaggcaattaatttcttggaaaagaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 cacaaggccacaagtgctggattgaaggaccaagaggcaattaatttcttggaaaagaag 687
Query: 301 atgaagaatgacccttcatttacctatgaggagacagttcagactgccatttctgcctta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 atgaagaatgacccttcatttacctatgaggagacagttcagactgccatttctgcctta 747
Query: 361 caatcagttcttcaggaggattttaaggccactgagattgaggttggagtggtgcggaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 caatcagttcttcaggaggattttaaggccactgagattgaggttggagtggtgcggaag 807
Query: 421 gataatccagaattcagagttctatccaccgatgagattgatgagcacttgactgcaata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 gataatccagaattcagagttctatccaccgatgagattgatgagcacttgactgcaata 867
Query: 481 agcgagcgtgattga 495
|||||||||||||||
Sbjct: 868 agcgagcgtgattga 882
>gnl|LJGI|TC80997 homologue to UniRef100_Q9XG77 Cluster: Proteasome subunit alpha
type-6; n=1; Nicotiana tabacum|Rep: Proteasome subunit
alpha type-6 - Nicotiana tabacum (Common tobacco),
partial (48%)
Length = 481
Score = 208 bits (105), Expect = 2e-53
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 1 atgacagctgatgctaggacactggttcaacaagcaagaaatgaagcagctgaatttcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atgacagctgatgctaggacactggttcaacaagcaagaaatgaagcagctgaatttcgg 436
Query: 61 cacacatatggatatgagatgcctgtggacgtattagctaaatgg 105
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cacacatatggatatgagatgcctgtggacgtattagctaaatgg 481